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PLAAT3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:98.6 nTPM
FANTOM5:82.0 Scaled Tags Per Million
Pig:18.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA058997
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 98.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 98.6
Samples: 246

Max nTPM: 277.2
Min nTPM: 24.0
Std nTPM: 39.9
Median nTPM: 90.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 277.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 234.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 226.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 218.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 217.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 214.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 208.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 203.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 198.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 181.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 178.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 174.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 170.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 167.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 166.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 161.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 160.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 159.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 158.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 157.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 154.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 153.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 153.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 153.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 152.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 149.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 146.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 146.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 145.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 145.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 144.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 141.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 141.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 136.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 136.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 135.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 134.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 134.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 134.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 132.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 132.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 131.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 131.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 130.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 129.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 129.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 129.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 129.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 127.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 126.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 125.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 124.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 123.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 123.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 122.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 120.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 119.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 119.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 119.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 119.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 118.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 118.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 118.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 117.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 117.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 116.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 116.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 115.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 115.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 114.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 113.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 113.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 112.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 111.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 111.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 110.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 109.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 109.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 109.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 108.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 108.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 108.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 107.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 106.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 105.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 105.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 104.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 104.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 103.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 103.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 103.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 102.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 102.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 101.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 100.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 100.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 100.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 100.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 100.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 100.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 98.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 98.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 97.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 97.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 97.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 97.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 96.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 95.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 93.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 93.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 92.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 91.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 91.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 91.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 90.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 90.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 89.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 89.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 88.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 87.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 87.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 86.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 86.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 86.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 85.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 85.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 85.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 85.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 83.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 82.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 82.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 82.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 82.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 82.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 82.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 81.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 81.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 81.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 81.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 80.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 80.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 79.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 79.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 79.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 79.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 78.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 77.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 77.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 77.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 77.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 77.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 76.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 76.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 75.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 75.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 74.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 74.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 74.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 73.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 73.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 73.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 71.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 71.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 71.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 71.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 70.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 69.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 69.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 69.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 69.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 69.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 69.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 68.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 68.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 68.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 67.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 66.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 65.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 65.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 65.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 65.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 65.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 64.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 64.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 64.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 63.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 63.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 62.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 62.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 61.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 61.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 61.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 61.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 60.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 58.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 57.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 57.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 55.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 55.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 54.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 54.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 52.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 50.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 49.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 47.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 47.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 46.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 39.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 38.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 36.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 34.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 82.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.0
FF:10164-103B2 76 years, female 82.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 18.1
Pig sample Sample description nTPM
Caudate
nTPM: 18.1
Samples: 4

Max nTPM: 20.6
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 20.0
Sample C Male 20.6
Sample D Male 16.3

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