HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		60.438
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.1 nTPM
HPA:70.1 nTPM
GTEx:93.6 nTPM
FANTOM5:79.0 Scaled Tags Per Million
Mouse:128.7 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057790
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA057790
Hippocampal formation mean intensity 60.438
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 40.626
Molecular layer of the dentate gyrus 35.533
Granular dentate gyrus 28.227
CA1 - oriens layer 35.438
CA1 - pyramidal layer 27.029
CA1 - radiatum layer 36.120
CA2 - oriens layer 37.172
CA2 - pyramidal layer 31.833
CA2 - radiatum layer 34.396
CA3 - oriens layer 17.973
CA3 - pyramidal layer 18.606
CA3 - radiatum layer 20.955
Stratum lucidum 37.475
Lacunosum moleculare 31.555
Subiculum 60.438

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.1
Sample id Sample description nTPM
Hippocampus
nTPM: 62.6
2529 Female, age 94, left hemisphere 77.2
2621 Female, age 67, right hemisphere 72.1
1911 Female, age 85, right hemisphere 65.8
2148 Female, age 91, left hemisphere 64.7
1898 Male, age 80, left hemisphere 51.5
1855 Male, age 76, left hemisphere 44.4
Dentate gyrus
nTPM: 61.7
2531 Female, age 67, both hemispheres 86.8
2530 Female, age 94, left hemisphere 67.1
1927 Female, age 91, both hemispheres 61.3
2528 Male, age 74, both hemispheres 55.6
2246 Female, age 85, both hemispheres 53.9
2010 Male, age 76, both hemispheres 45.8
Entorhinal gyrus
nTPM: 55.9
2613 Female, age 94, left hemisphere 65.7
2686 Male, age 75, right hemisphere 64.7
2117 Female, age 91, right hemisphere 55.3
2764 Male, age 80, right hemisphere 51.0
1787 Male, age 76, left hemisphere 49.6
1938 Female, age 85, left hemisphere 48.7
Hippocampus, CA1
nTPM: 52.0
2527 Male, age 74, both hemispheres 58.3
1873 Female, age 85, both hemispheres 56.3
2749 Male, age 80, left hemisphere 52.5
2045 Male, age 76, both hemispheres 49.1
2082 Female, age 91, right hemisphere 43.5
Hippocampus, CA2
nTPM: 53.0
1963 Male, age 80, left hemisphere 68.0
2437 Female, age 94, left hemisphere 56.7
1892 Male, age 76, both hemispheres 54.0
2113 Female, age 91, right hemisphere 49.8
1940 Female, age 85, left hemisphere 45.1
2249 Male, age 74, both hemispheres 44.6
Hippocampus, CA3
nTPM: 70.1
2620 Female, age 94, left hemisphere 106.2
2861 Female, age 67, both hemispheres 84.3
2137 Male, age 80, left hemisphere 69.6
1867 Male, age 76, both hemispheres 65.2
1891 Female, age 85, both hemispheres 56.2
2436 Male, age 74, both hemispheres 38.9
Parahippocampal cortex
nTPM: 51.6
2622 Female, age 67, right hemisphere 63.4
2692 Male, age 74, both hemispheres 60.4
2245 Female, age 91, both hemispheres 58.8
1933 Female, age 85, both hemispheres 50.7
2532 Female, age 72, left hemisphere 50.7
2693 Female, age 94, both hemispheres 48.5
2018 Male, age 76, both hemispheres 47.9
2250 Female, age 67, right hemisphere 47.9
1990 Female, age 91, right hemisphere 44.3
1850 Male, age 80, both hemispheres 43.6
Perirhinal gyrus
nTPM: 44.5
2521 Female, age 94, right hemisphere 46.3
1794 Male, age 80, right hemisphere 45.3
1841 Female, age 85, right hemisphere 45.0
2848 Male, age 76, right hemisphere 44.0
1847 Female, age 91, left hemisphere 42.0
Subiculum
nTPM: 51.9
2042 Male, age 76, both hemispheres 57.9
1901 Male, age 80, both hemispheres 55.0
2729 Female, age 91, right hemisphere 52.4
2619 Male, age 74, both hemispheres 50.3
2438 Female, age 94, left hemisphere 49.1
1977 Female, age 85, both hemispheres 46.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.6
Samples: 197

Max nTPM: 218.9
Min nTPM: 12.0
Std nTPM: 31.9
Median nTPM: 86.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 218.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 212.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 201.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 193.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 173.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 172.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 168.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 165.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 153.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 148.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 147.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.0
FF:10153-102I9 76 years, female 83.7
FF:10169-103B7 60 years, female 74.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 128.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.7
Samples: 4

Max nTPM: 104.6
Min nTPM: 57.3
Sample A Male 76.2
Sample B Male 57.3
Sample C Female 104.6
Sample D Female 76.7
Hippocampal formation
nTPM: 128.7
Samples: 4

Max nTPM: 133.7
Min nTPM: 121.9
Sample A Male 131.3
Sample B Male 133.7
Sample C Female 127.8
Sample D Female 121.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
77371857 Antisense, RP_070129_01_B10, Mouse strain C57BL/6J (56 days, male) 7.3
1735 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 6.6
1734 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 2.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.