AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		37.515
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.8 nTPM
HPA:70.8 nTPM
GTEx:85.6 nTPM
FANTOM5:73.2 Scaled Tags Per Million
Mouse:202.3 nTPM
Allen mouse:9.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA057790
Amygdala mean intensity 37.515
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 23.430
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 19.413
Cortical amygdala 37.515
Central amygdala 27.412
Medial amygdaloid nucleus 20.441

AMYGDALA - HPA Brain RNA-seq
Max nTPM 70.8
Sample id Sample description nTPM
Amygdala
nTPM: 63.1
2814 Male, age 76, right hemisphere 90.9
2695 Female, age 67, right hemisphere 63.7
2517 Female, age 94, left hemisphere 60.5
2514 Male, age 75, right hemisphere 55.2
1987 Female, age 91, left hemisphere 45.2
Basal amygdala
nTPM: 66.5
2827 Female, age 67, right hemisphere 78.1
2609 Male, age 75, right hemisphere 74.4
1955 Male, age 76, both hemispheres 68.7
2685 Female, age 94, left hemisphere 68.7
2110 Male, age 80, left hemisphere 55.4
2243 Female, age 91, right hemisphere 54.0
Central amygdala
nTPM: 63.2
1905 Male, age 76, both hemispheres 81.2
2826 Female, age 94, left hemisphere 74.2
2515 Male, age 75, right hemisphere 60.1
2239 Male, age 80, left hemisphere 52.6
2701 Female, age 91, right hemisphere 48.1
Corticomedial amygdala
nTPM: 58.5
2428 Male, age 75, right hemisphere 69.4
2829 Male, age 80, left hemisphere 59.0
2535 Female, age 67, right hemisphere 58.6
2240 Male, age 76, both hemispheres 56.7
2429 Female, age 94, left hemisphere 53.8
2242 Female, age 91, right hemisphere 53.4
Lateral amygdala
nTPM: 70.8
1883 Male, age 76, both hemispheres 85.5
2830 Female, age 67, right hemisphere 76.4
2256 Male, age 80, left hemisphere 70.0
2516 Male, age 75, right hemisphere 69.5
2534 Female, age 94, left hemisphere 66.0
2255 Female, age 91, right hemisphere 57.6
Stria terminalis, bed nucleus
nTPM: 54.1
2486 Female, age 94, both hemispheres 77.5
2201 Male, age 74, unknown 45.7
1974 Female, age 91, both hemispheres 39.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 85.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 85.6
Samples: 152

Max nTPM: 171.7
Min nTPM: 3.8
Std nTPM: 25.8
Median nTPM: 80.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 171.7
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 159.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 158.9
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 146.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 138.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 136.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 136.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 135.6
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 129.2
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 124.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 123.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 73.2
FF:10151-102I7 76 years, female 73.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 202.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 202.3
Samples: 4

Max nTPM: 288.9
Min nTPM: 133.0
Sample A Male 133.0
Sample B Male 185.4
Sample C Female 288.9
Sample D Female 201.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.9
77371857 Antisense, RP_070129_01_B10, Mouse strain C57BL/6J (56 days, male) 10.4
1735 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 9.3
1734 Antisense, RP_040507_02_H04, Mouse strain C57BL/6J (56 days, male) 4.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.