HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.5 nTPM
HPA:10.5 nTPM
GTEx:1.3 nTPM
FANTOM5:22.4 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:26.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040603
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
1855 Male, age 76, left hemisphere 11.0
2529 Female, age 94, left hemisphere 10.1
1911 Female, age 85, right hemisphere 9.7
2148 Female, age 91, left hemisphere 9.6
1898 Male, age 80, left hemisphere 9.5
2621 Female, age 67, right hemisphere 9.5
Dentate gyrus
nTPM: 9.8
2010 Male, age 76, both hemispheres 10.6
2528 Male, age 74, both hemispheres 9.9
2531 Female, age 67, both hemispheres 9.9
2530 Female, age 94, left hemisphere 9.7
1927 Female, age 91, both hemispheres 9.5
2246 Female, age 85, both hemispheres 9.3
Entorhinal gyrus
nTPM: 8.2
2117 Female, age 91, right hemisphere 9.6
1938 Female, age 85, left hemisphere 8.7
1787 Male, age 76, left hemisphere 8.6
2764 Male, age 80, right hemisphere 8.0
2613 Female, age 94, left hemisphere 7.5
2686 Male, age 75, right hemisphere 7.0
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 11.7
2045 Male, age 76, both hemispheres 11.4
2527 Male, age 74, both hemispheres 10.8
1873 Female, age 85, both hemispheres 10.6
2082 Female, age 91, right hemisphere 8.2
Hippocampus, CA2
nTPM: 9.0
2249 Male, age 74, both hemispheres 9.8
1940 Female, age 85, left hemisphere 9.4
2437 Female, age 94, left hemisphere 9.2
1892 Male, age 76, both hemispheres 9.0
1963 Male, age 80, left hemisphere 9.0
2113 Female, age 91, right hemisphere 7.4
Hippocampus, CA3
nTPM: 10.2
2620 Female, age 94, left hemisphere 12.3
2137 Male, age 80, left hemisphere 11.1
1867 Male, age 76, both hemispheres 10.1
1891 Female, age 85, both hemispheres 9.6
2861 Female, age 67, both hemispheres 9.6
2436 Male, age 74, both hemispheres 8.3
Parahippocampal cortex
nTPM: 8.0
2692 Male, age 74, both hemispheres 9.4
1850 Male, age 80, both hemispheres 8.2
1990 Female, age 91, right hemisphere 8.2
2250 Female, age 67, right hemisphere 8.2
2693 Female, age 94, both hemispheres 8.2
1933 Female, age 85, both hemispheres 8.0
2245 Female, age 91, both hemispheres 7.8
2532 Female, age 72, left hemisphere 7.7
2018 Male, age 76, both hemispheres 7.4
2622 Female, age 67, right hemisphere 7.2
Perirhinal gyrus
nTPM: 8.7
2521 Female, age 94, right hemisphere 9.2
1847 Female, age 91, left hemisphere 8.9
1841 Female, age 85, right hemisphere 8.7
1794 Male, age 80, right hemisphere 8.4
2848 Male, age 76, right hemisphere 8.2
Subiculum
nTPM: 8.8
2042 Male, age 76, both hemispheres 9.9
1901 Male, age 80, both hemispheres 9.2
2619 Male, age 74, both hemispheres 8.7
2438 Female, age 94, left hemisphere 8.6
2729 Female, age 91, right hemisphere 8.6
1977 Female, age 85, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.3
Samples: 197

Max nTPM: 4.6
Min nTPM: 0.0
Std nTPM: 0.8
Median nTPM: 1.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 4.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 4.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 3.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 3.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 3.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 3.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 3.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 3.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 3.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 3.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 2.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.4
FF:10153-102I9 76 years, female 30.2
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.7
Sample A Female 14.2
Sample B Female 13.1
Sample C Male 12.7
Sample D Male 12.9
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.3
Sample A Female 11.4
Sample B Female 10.6
Sample C Male 11.2
Sample D Male 9.3
Subiculum
nTPM: 11.7
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.4
Sample A Female 14.5
Sample B Female 11.1
Sample C Male 10.9
Sample D Male 10.4
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.5
Sample A Female 12.5
Sample B Female 10.5
Sample C Male 12.7
Sample D Male 12.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 25.8
Min nTPM: 22.4
Sample A Male 24.6
Sample B Male 24.2
Sample C Female 22.4
Sample D Female 25.8
Hippocampal formation
nTPM: 26.2
Samples: 4

Max nTPM: 27.3
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 27.3
Sample C Female 26.9
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70539154 Antisense, RP_050321_04_A11, Mouse strain C57BL/6J (56 days, male) 0.1

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