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BASP1
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  • BASP1
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: High
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: High
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: High
White matter cells - nucleus: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:103.0 nTPM
HPA:103.0 nTPM
GTEx:135.0 nTPM
FANTOM5:210.6 Scaled Tags Per Million
Pig:107.5 nTPM
Mouse:8.6 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045218Antibody HPA050333
Bergmann glia - cytoplasm/membrane Not detected-
Bergmann glia - nucleus Not detected-
GLUC cells - cytoplasm/membrane Not detected-
GLUC cells - nucleus Not detected-
Purkinje cells -Not detected
Purkinje cells - cytoplasm/membrane Not detected-
Purkinje cells - dendrites Not detected-
Purkinje cells - nucleus Not detected-
Cells in granular layer -Not detected
Cells in molecular layer -High
Granular cells - cytoplasm/membrane Not detected-
Granular cells - nucleus Not detected-
Molecular layer - neuropil High-
Molecular layer cells - cytoplasm/membrane Not detected-
Molecular layer cells - nucleus Not detected-
Processes in granular layer Not detected-
Processes in molecular layer Not detected-
Processes in white matter Not detected-
Synaptic glomeruli - capsule High-
Synaptic glomeruli - core Not detected-
White matter cells - cytoplasm/membrane High-
White matter cells - nucleus Not detected-





CEREBELLUM - HPA Brain RNA-seq
Max nTPM 103.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 103.0
2101 Male, age 74, right hemisphere 133.3
1768 Female, age 72, unknown 123.3
1774 Male, age 80, left hemisphere 108.6
1769 Male, age 76, right hemisphere 105.9
2006 Male, age 61, right hemisphere 101.4
2055 Female, age 91, right hemisphere 100.3
1788 Male, age 55, unknown 80.2
2003 Female, age 85, right hemisphere 71.1
Cerebellar nuclei
nTPM: 81.4
2882 Male, age 76, left hemisphere 90.5
1966 Female, age 91, left hemisphere 86.2
2318 Male, age 74, left hemisphere 82.3
2175 Male, age 61, right hemisphere 81.8
1879 Male, age 55, unknown 81.6
2783 Female, age 72, unknown 81.5
2177 Female, age 85, both hemispheres 79.2
2005 Male, age 80, left hemisphere 78.9
1871 Male, age 74, unknown 70.8
Flocculonodular lobe
nTPM: 92.1
1771 Male, age 80, left hemisphere 107.4
1767 Male, age 76, left hemisphere 98.7
1792 Male, age 74, unknown 93.4
2176 Female, age 91, right hemisphere 91.8
1765 Male, age 55, unknown 91.7
2004 Male, age 61, right hemisphere 81.1
1835 Female, age 85, right hemisphere 80.8
Vermis
nTPM: 93.7
1751 Male, age 74, right hemisphere 142.6
1770 Male, age 76, left hemisphere 102.7
1778 Female, age 91, left hemisphere 97.3
1825 Male, age 74, unknown 92.6
1928 Female, age 72, unknown 91.0
2460 Male, age 61, both hemispheres 87.1
1988 Female, age 85, left hemisphere 84.8
1766 Male, age 55, unknown 74.6
2834 Male, age 80, left hemisphere 70.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 135.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 135.0
Samples: 215

Max nTPM: 235.2
Min nTPM: 59.3
Std nTPM: 29.1
Median nTPM: 136.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 235.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 214.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 205.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 197.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 196.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 188.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 187.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 186.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 186.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 186.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 183.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 183.7
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 179.2
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 178.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 177.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 176.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 175.1
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 174.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 173.8
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 173.7
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 172.3
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 171.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 169.3
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 169.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 168.1
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 167.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 166.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 166.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 163.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 162.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 161.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 161.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 161.4
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 161.4
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 159.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 159.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 159.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 159.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 158.7
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 158.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 158.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 158.2
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 157.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 157.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 157.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 157.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 156.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 155.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 155.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 155.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 155.1
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 155.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 154.9
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 154.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 154.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 154.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 154.1
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 154.0
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 153.7
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 153.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 153.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 153.5
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 152.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 152.8
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 152.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 152.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 152.0
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 152.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 151.9
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 151.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 150.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 150.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 150.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 149.4
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 148.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 148.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 148.1
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 147.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 147.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 147.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 147.2
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 146.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 145.7
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 145.7
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 145.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 145.6
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 145.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 145.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 143.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 143.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 143.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 143.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 142.9
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 142.0
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 141.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 141.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 141.7
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 141.4
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 141.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 140.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 140.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 139.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 137.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 137.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 137.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 137.3
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 136.4
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 136.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 135.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 134.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 134.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 133.9
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 133.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 133.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 132.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 132.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 132.3
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 131.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 131.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 131.3
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 131.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 131.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 130.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 130.3
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 129.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 128.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 127.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 127.4
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 127.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 127.2
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 126.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 126.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 125.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 125.5
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 125.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 124.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 122.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 121.4
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 121.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 121.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 120.5
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 120.1
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 119.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 119.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 119.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 118.9
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 118.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 118.0
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 117.3
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 117.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 117.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 117.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 116.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 116.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 115.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 115.2
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 115.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 114.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 113.5
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 113.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 113.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 112.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 112.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 111.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 111.2
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 111.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 111.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 110.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 110.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 110.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 109.7
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 109.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 109.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 108.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 108.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 108.5
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 108.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 108.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 107.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 106.0
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 104.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 104.3
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 104.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 104.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 104.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 102.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 102.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 101.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 100.9
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 100.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 100.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 100.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 98.1
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 98.1
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 97.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 96.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 95.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 95.1
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 93.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 92.4
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 91.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 89.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 88.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 87.1
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 87.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 85.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 84.2
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 83.6
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 82.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 78.7
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 78.7
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 78.0
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 77.8
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 75.5
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 59.3
Show allShow less
Brain - Cerebellum
Average nTPM: 103.3
Samples: 241

Max nTPM: 163.8
Min nTPM: 49.9
Std nTPM: 23.0
Median nTPM: 101.5
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 163.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 163.4
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 159.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 154.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 152.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 151.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 149.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 148.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 148.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 146.8
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 146.5
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 146.3
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 145.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 143.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 142.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 141.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 138.6
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 138.0
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 137.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 136.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 135.0
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 134.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 134.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 133.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 133.0
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 131.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 131.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 131.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 130.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 129.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 129.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 129.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 128.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 128.4
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 128.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 128.1
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 127.8
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 127.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 126.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 126.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 126.0
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 125.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 125.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 125.0
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 124.5
GTEX-11EI6-2926-SM-5985U 60-69 years, male 123.4
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 122.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 122.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 122.7
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 122.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 122.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 121.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 121.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 121.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 121.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 120.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 119.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 119.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 119.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 118.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 118.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 118.7
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 118.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 118.6
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 118.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 118.2
GTEX-12126-0926-SM-5FQTW 20-29 years, male 117.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 117.9
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 117.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 117.3
GTEX-WL46-2826-SM-3LK81 50-59 years, male 117.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 117.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 116.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 116.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 116.0
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 115.8
GTEX-X261-3126-SM-4PQZC 50-59 years, male 115.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 115.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 114.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 114.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 113.5
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 113.4
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 112.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 112.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 112.2
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 111.8
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 111.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 111.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 111.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 110.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 110.4
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 110.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 110.1
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 109.5
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 109.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 109.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 109.1
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 108.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 108.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 108.2
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 107.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 107.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 107.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 107.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 106.7
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 106.5
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 106.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 106.3
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 105.6
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 105.2
GTEX-144GL-2926-SM-5O99F 50-59 years, male 105.0
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 104.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 104.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 104.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 103.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 103.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 103.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 102.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 102.1
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 101.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 101.5
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 101.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 101.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 100.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 100.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 100.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 100.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 100.0
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 100.0
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 99.9
GTEX-145LS-3026-SM-5O99S 60-69 years, female 99.7
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 98.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 98.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 98.4
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 98.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 97.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 97.6
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 97.5
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 97.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 97.2
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 96.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 96.4
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 96.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 96.0
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 95.6
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 95.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 95.5
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 95.4
GTEX-11ONC-3026-SM-5985W 60-69 years, male 94.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 94.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 94.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 94.0
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 93.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 93.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 93.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 93.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 92.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 92.8
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 92.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 92.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 92.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 92.0
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 91.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 91.6
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 91.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 91.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 91.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 90.7
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 90.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 90.0
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 89.9
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 89.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 88.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 88.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 88.6
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 88.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 88.4
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 88.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 88.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 87.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 87.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 87.0
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 86.0
GTEX-17HII-2926-SM-79OMK 50-59 years, male 85.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 85.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 84.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 83.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 83.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 83.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 83.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 83.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 83.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 83.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 83.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 82.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 82.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 81.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 80.8
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 80.2
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 79.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 79.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 79.3
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 79.1
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 78.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 78.3
GTEX-11DYG-2926-SM-5H132 60-69 years, male 78.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 78.1
GTEX-15G19-2826-SM-6M48K 60-69 years, male 78.0
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 77.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 77.7
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 76.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 76.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 75.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 75.1
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 75.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 73.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 73.2
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 72.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 71.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 71.1
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 70.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 70.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 70.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 70.2
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 69.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 69.5
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 69.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 68.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 67.6
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 67.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 66.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 65.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 64.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 63.6
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 61.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 61.4
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 60.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 60.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 57.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 52.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 49.9
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 210.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 210.6
FF:10166-103B4 76 years, female 231.2
FF:10083-102B2 22-68 years, mixed 190.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 107.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 107.5
Samples: 4

Max nTPM: 114.3
Min nTPM: 96.3
Sample A Female 105.9
Sample B Female 114.3
Sample C Male 96.3
Sample D Male 113.6

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 8.6
Mouse sample Sample description nTPM
Cerebellum
nTPM: 8.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.0
Sample A Male 6.0
Sample B Male 8.6
Sample C Female 10.7
Sample D Female 9.0

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