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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:121.8 nTPM
FANTOM5:585.7 Scaled Tags Per Million
Pig:129.3 nTPM

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA067773
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses Low

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA067773
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 121.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 121.8
Samples: 246

Max nTPM: 267.3
Min nTPM: 14.5
Std nTPM: 53.9
Median nTPM: 123.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 267.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 249.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 245.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 238.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 227.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 226.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 223.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 220.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 218.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 218.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 218.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 218.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 208.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 206.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 204.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 204.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 200.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 199.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 198.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 198.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 195.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 195.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 195.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 194.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 194.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 191.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 190.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 189.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 188.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 186.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 186.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 186.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 184.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 182.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 181.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 181.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 179.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 177.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 176.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 176.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 176.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 174.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 173.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 173.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 173.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 171.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 170.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 170.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 169.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 169.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 169.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 169.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 168.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 166.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 166.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 166.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 165.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 165.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 164.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 164.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 163.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 160.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 160.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 159.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 158.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 157.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 155.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 155.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 154.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 154.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 152.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 151.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 151.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 151.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 151.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 150.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 150.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 149.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 149.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 148.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 148.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 147.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 147.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 147.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 147.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 147.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 146.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 146.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 146.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 145.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 143.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 142.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 142.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 140.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 139.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 138.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 137.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 137.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 136.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 136.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 135.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 132.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 132.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 132.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 131.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 130.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 129.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 129.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 129.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 128.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 127.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 126.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 126.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 126.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 125.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 125.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 124.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 124.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 123.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 123.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 123.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 123.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 122.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 122.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 121.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 121.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 118.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 117.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 117.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 115.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 115.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 115.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 115.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 114.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 112.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 111.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 109.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 107.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 106.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 106.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 105.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 104.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 103.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 103.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 102.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 101.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 101.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 101.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 101.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 100.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 98.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 97.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 97.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 96.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 96.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 95.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 95.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 94.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 94.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 93.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 92.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 91.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 91.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 91.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 90.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 90.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 90.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 88.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 87.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 86.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 83.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 82.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 82.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 82.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 81.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 79.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 76.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 76.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 75.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 75.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 74.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 73.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 73.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 71.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 68.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 67.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 64.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 63.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 61.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 60.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 59.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 59.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 59.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 58.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 58.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 54.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 53.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 49.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 49.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 48.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 46.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 46.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 45.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 43.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 42.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 41.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 41.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 40.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 40.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 36.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 35.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 29.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 28.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 27.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 22.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 19.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 18.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 585.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 585.7
FF:10164-103B2 76 years, female 585.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 129.3
Pig sample Sample description nTPM
Caudate
nTPM: 129.3
Samples: 4

Max nTPM: 158.2
Min nTPM: 94.5
Sample A Female 94.5
Sample B Female 142.2
Sample C Male 158.2
Sample D Male 122.3

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