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LY6H
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:93.3 nTPM
FANTOM5:73.7 Scaled Tags Per Million
Pig:43.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA077218
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 93.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 93.3
Samples: 246

Max nTPM: 259.6
Min nTPM: 26.3
Std nTPM: 40.2
Median nTPM: 87.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 259.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 253.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 234.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 233.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 193.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 187.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 182.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 178.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 174.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 173.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 168.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 167.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 166.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 164.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 161.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 161.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 157.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 157.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 154.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 154.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 150.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 148.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 148.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 148.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 147.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 147.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 145.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 143.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 142.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 136.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 133.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 133.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 130.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 130.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 129.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 127.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 126.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 126.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 126.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 126.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 126.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 125.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 125.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 124.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 123.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 123.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 122.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 121.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 121.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 120.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 120.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 120.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 115.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 114.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 114.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 114.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 113.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 113.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 113.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 113.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 112.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 110.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 110.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 110.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 110.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 109.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 108.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 107.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 107.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 107.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 107.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 106.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 106.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 105.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 105.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 104.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 104.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 104.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 103.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 101.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 100.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 100.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 99.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 99.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 99.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 98.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 98.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 98.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 97.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 97.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 96.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 96.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 95.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 95.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 95.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 95.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 95.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 95.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 94.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 94.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 91.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 91.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 91.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 90.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 90.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 90.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 90.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 89.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 89.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 88.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 88.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 88.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 88.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 87.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 87.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 86.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 86.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 85.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 85.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 84.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 84.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 84.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 84.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 84.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 83.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 83.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 82.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 81.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 81.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 81.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 80.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 80.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 79.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 79.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 79.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 79.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 78.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 78.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 78.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 77.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 76.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 76.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 76.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 75.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 74.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 73.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 72.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 70.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 70.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 69.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 68.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 68.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 67.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 67.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 66.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 64.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 63.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 62.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 62.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 60.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 58.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 58.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 57.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 57.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 55.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 54.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 53.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 52.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 51.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 49.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 49.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 49.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 49.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 47.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 47.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 47.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 46.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 44.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 44.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 44.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 44.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 42.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 42.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 38.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 38.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 37.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 31.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 27.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 26.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 73.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 73.7
FF:10164-103B2 76 years, female 73.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 43.6
Pig sample Sample description nTPM
Caudate
nTPM: 43.6
Samples: 4

Max nTPM: 56.5
Min nTPM: 30.6
Sample A Female 38.5
Sample B Female 56.5
Sample C Male 48.9
Sample D Male 30.6

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