HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.8 nTPM
HPA:60.8 nTPM
GTEx:121.8 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:48.0 nTPM
Mouse:39.7 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030302
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.8
Sample id Sample description nTPM
Hippocampus
nTPM: 60.8
2621 Female, age 67, right hemisphere 76.4
2148 Female, age 91, left hemisphere 66.0
2529 Female, age 94, left hemisphere 61.5
1898 Male, age 80, left hemisphere 60.4
1911 Female, age 85, right hemisphere 51.1
1855 Male, age 76, left hemisphere 49.6
Dentate gyrus
nTPM: 57.9
2530 Female, age 94, left hemisphere 71.9
1927 Female, age 91, both hemispheres 71.1
2531 Female, age 67, both hemispheres 62.1
2010 Male, age 76, both hemispheres 49.2
2528 Male, age 74, both hemispheres 48.1
2246 Female, age 85, both hemispheres 45.3
Entorhinal gyrus
nTPM: 54.1
2613 Female, age 94, left hemisphere 72.5
1938 Female, age 85, left hemisphere 56.0
1787 Male, age 76, left hemisphere 55.7
2764 Male, age 80, right hemisphere 53.1
2686 Male, age 75, right hemisphere 48.5
2117 Female, age 91, right hemisphere 38.8
Hippocampus, CA1
nTPM: 55.7
2749 Male, age 80, left hemisphere 79.3
2527 Male, age 74, both hemispheres 63.3
1873 Female, age 85, both hemispheres 53.6
2082 Female, age 91, right hemisphere 43.1
2045 Male, age 76, both hemispheres 39.1
Hippocampus, CA2
nTPM: 58.4
1963 Male, age 80, left hemisphere 101.1
1892 Male, age 76, both hemispheres 60.9
2437 Female, age 94, left hemisphere 57.8
2113 Female, age 91, right hemisphere 50.2
2249 Male, age 74, both hemispheres 42.2
1940 Female, age 85, left hemisphere 38.4
Hippocampus, CA3
nTPM: 58.6
2861 Female, age 67, both hemispheres 87.5
2137 Male, age 80, left hemisphere 81.7
2620 Female, age 94, left hemisphere 54.5
1867 Male, age 76, both hemispheres 49.1
1891 Female, age 85, both hemispheres 40.0
2436 Male, age 74, both hemispheres 39.1
Parahippocampal cortex
nTPM: 48.2
2245 Female, age 91, both hemispheres 60.6
2622 Female, age 67, right hemisphere 57.1
1850 Male, age 80, both hemispheres 49.4
2018 Male, age 76, both hemispheres 49.2
2250 Female, age 67, right hemisphere 48.2
2692 Male, age 74, both hemispheres 48.0
1933 Female, age 85, both hemispheres 46.7
1990 Female, age 91, right hemisphere 42.1
2693 Female, age 94, both hemispheres 41.3
2532 Female, age 72, left hemisphere 39.4
Perirhinal gyrus
nTPM: 51.4
1847 Female, age 91, left hemisphere 61.6
1794 Male, age 80, right hemisphere 53.2
2521 Female, age 94, right hemisphere 50.0
2848 Male, age 76, right hemisphere 47.9
1841 Female, age 85, right hemisphere 44.2
Subiculum
nTPM: 42.4
1901 Male, age 80, both hemispheres 45.5
1977 Female, age 85, both hemispheres 43.4
2619 Male, age 74, both hemispheres 42.5
2729 Female, age 91, right hemisphere 42.4
2042 Male, age 76, both hemispheres 42.0
2438 Female, age 94, left hemisphere 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.8
Samples: 197

Max nTPM: 349.6
Min nTPM: 12.4
Std nTPM: 57.5
Median nTPM: 116.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 349.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 301.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 282.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 279.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 272.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 265.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 241.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 236.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 235.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 225.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 220.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.0
FF:10153-102I9 76 years, female 116.7
FF:10169-103B7 60 years, female 95.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 53.9
Min nTPM: 34.8
Sample A Female 53.9
Sample B Female 48.1
Sample C Male 34.9
Sample D Male 34.8
Entorhinal cortex
nTPM: 48.0
Samples: 4

Max nTPM: 63.0
Min nTPM: 37.4
Sample A Female 40.5
Sample B Female 50.9
Sample C Male 63.0
Sample D Male 37.4
Subiculum
nTPM: 40.8
Samples: 4

Max nTPM: 52.3
Min nTPM: 33.8
Sample A Female 52.3
Sample B Female 37.5
Sample C Male 39.6
Sample D Male 33.8
Ventral hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 60.1
Min nTPM: 41.2
Sample A Female 47.5
Sample B Female 41.2
Sample C Male 60.1
Sample D Male 41.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.2
Samples: 4

Max nTPM: 39.4
Min nTPM: 36.8
Sample A Male 38.9
Sample B Male 39.4
Sample C Female 37.5
Sample D Female 36.8
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 41.2
Min nTPM: 38.1
Sample A Male 41.2
Sample B Male 39.7
Sample C Female 40.0
Sample D Female 38.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
69262298 Antisense, RP_050303_01_G04, Mouse strain C57BL/6J (56 days, male) 12.4

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