COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:99.6 nTPM
HPA:99.6 nTPM
GTEx:88.7 nTPM
FANTOM5:153.6 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 99.6
overview
Male, age 54 		Colon sample 67
nTPM: 108.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 100.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 111.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 100.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 85.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 102.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 90.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 105
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 86.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 126.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 98.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 91.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 86.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 88.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 72.7
Samples: 373

Max nTPM: 189.1
Min nTPM: 34.3
Std nTPM: 20.4
Median nTPM: 69.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 189.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 176.6
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 163.5
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 155.4
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 150.3
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 134.5
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 131.7
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 127.8
GTEX-1CAMS-2626-SM-7PBY3 40-49 years, female 127.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 126.7
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 118.2
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Colon - Transverse
Average nTPM: 88.7
Samples: 406

Max nTPM: 276.0
Min nTPM: 35.8
Std nTPM: 30.4
Median nTPM: 82.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 276.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 218.1
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 209.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 201.0
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 186.6
GTEX-1QPFJ-2326-SM-E6CR7 30-39 years, female 175.1
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 173.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 170.7
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 170.0
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 156.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 156.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 153.6
FF:10014-101C5 62,83,84 years, mixed 153.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.