HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:9.8 nTPM
HPA:9.8 nTPM
GTEx:10.4 nTPM
FANTOM5:89.6 Scaled Tags Per Million
Pig:28.9 nTPM
Mouse:14.3 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 4.8
2148 Female, age 91, left hemisphere 8.2
2529 Female, age 94, left hemisphere 6.1
2621 Female, age 67, right hemisphere 5.7
1911 Female, age 85, right hemisphere 4.3
1898 Male, age 80, left hemisphere 2.4
1855 Male, age 76, left hemisphere 2.3
Dentate gyrus
nTPM: 6.2
2531 Female, age 67, both hemispheres 12.9
2246 Female, age 85, both hemispheres 8.4
2530 Female, age 94, left hemisphere 5.4
1927 Female, age 91, both hemispheres 5.2
2010 Male, age 76, both hemispheres 2.8
2528 Male, age 74, both hemispheres 2.5
Entorhinal gyrus
nTPM: 5.4
1938 Female, age 85, left hemisphere 8.1
1787 Male, age 76, left hemisphere 6.5
2764 Male, age 80, right hemisphere 6.5
2117 Female, age 91, right hemisphere 5.7
2686 Male, age 75, right hemisphere 2.9
2613 Female, age 94, left hemisphere 2.5
Hippocampus, CA1
nTPM: 5.3
2749 Male, age 80, left hemisphere 10.9
2527 Male, age 74, both hemispheres 6.7
2045 Male, age 76, both hemispheres 3.6
1873 Female, age 85, both hemispheres 2.9
2082 Female, age 91, right hemisphere 2.2
Hippocampus, CA2
nTPM: 4.3
2437 Female, age 94, left hemisphere 5.4
2249 Male, age 74, both hemispheres 5.0
1963 Male, age 80, left hemisphere 4.1
2113 Female, age 91, right hemisphere 4.0
1940 Female, age 85, left hemisphere 3.8
1892 Male, age 76, both hemispheres 3.6
Hippocampus, CA3
nTPM: 9.8
2620 Female, age 94, left hemisphere 18.5
2137 Male, age 80, left hemisphere 14.1
1891 Female, age 85, both hemispheres 9.7
2861 Female, age 67, both hemispheres 7.3
1867 Male, age 76, both hemispheres 5.0
2436 Male, age 74, both hemispheres 4.0
Parahippocampal cortex
nTPM: 7.1
2532 Female, age 72, left hemisphere 13.7
1850 Male, age 80, both hemispheres 8.6
2692 Male, age 74, both hemispheres 7.5
2693 Female, age 94, both hemispheres 7.5
2622 Female, age 67, right hemisphere 6.9
2245 Female, age 91, both hemispheres 6.7
2250 Female, age 67, right hemisphere 6.6
1933 Female, age 85, both hemispheres 6.1
1990 Female, age 91, right hemisphere 4.6
2018 Male, age 76, both hemispheres 2.7
Perirhinal gyrus
nTPM: 9.3
2521 Female, age 94, right hemisphere 11.8
1794 Male, age 80, right hemisphere 11.5
1841 Female, age 85, right hemisphere 10.5
2848 Male, age 76, right hemisphere 7.3
1847 Female, age 91, left hemisphere 5.4
Subiculum
nTPM: 8.8
1977 Female, age 85, both hemispheres 11.1
2438 Female, age 94, left hemisphere 11.0
1901 Male, age 80, both hemispheres 10.3
2042 Male, age 76, both hemispheres 8.9
2619 Male, age 74, both hemispheres 7.3
2729 Female, age 91, right hemisphere 4.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 24.6
Min nTPM: 5.4
Std nTPM: 3.0
Median nTPM: 10.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 23.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 21.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 18.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 16.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 15.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 15.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 14.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 14.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.6
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 80.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 30.7
Min nTPM: 25.5
Sample A Female 30.7
Sample B Female 28.9
Sample C Male 30.5
Sample D Male 25.5
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 30.3
Min nTPM: 25.3
Sample A Female 30.3
Sample B Female 27.2
Sample C Male 25.3
Sample D Male 25.9
Subiculum
nTPM: 26.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 25.1
Sample A Female 29.9
Sample B Female 25.1
Sample C Male 26.2
Sample D Male 25.7
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 29.2
Min nTPM: 24.1
Sample A Female 25.2
Sample B Female 24.1
Sample C Male 26.2
Sample D Male 29.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.5
Sample A Male 14.3
Sample B Male 13.9
Sample C Female 12.5
Sample D Female 16.3
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 13.8
Sample C Female 13.5
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
70228627 Antisense, RP_050524_04_B01, Mouse strain C57BL/6J (56 days, male) 9.0

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