HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:74.2 nTPM
HPA:74.2 nTPM
GTEx:96.7 nTPM
FANTOM5:59.8 Scaled Tags Per Million
Pig:105.6 nTPM
Mouse:188.4 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014662
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.2
Sample id Sample description nTPM
Hippocampus
nTPM: 64.2
1898 Male, age 80, left hemisphere 96.7
1855 Male, age 76, left hemisphere 88.2
2621 Female, age 67, right hemisphere 76.0
2148 Female, age 91, left hemisphere 63.6
1911 Female, age 85, right hemisphere 33.6
2529 Female, age 94, left hemisphere 27.0
Dentate gyrus
nTPM: 74.2
2530 Female, age 94, left hemisphere 116.5
1927 Female, age 91, both hemispheres 93.0
2010 Male, age 76, both hemispheres 88.4
2531 Female, age 67, both hemispheres 57.1
2246 Female, age 85, both hemispheres 45.9
2528 Male, age 74, both hemispheres 44.4
Entorhinal gyrus
nTPM: 66.9
2613 Female, age 94, left hemisphere 112.1
2764 Male, age 80, right hemisphere 82.4
1938 Female, age 85, left hemisphere 77.5
2686 Male, age 75, right hemisphere 56.4
1787 Male, age 76, left hemisphere 51.9
2117 Female, age 91, right hemisphere 21.1
Hippocampus, CA1
nTPM: 68.1
2749 Male, age 80, left hemisphere 137.2
1873 Female, age 85, both hemispheres 86.9
2045 Male, age 76, both hemispheres 46.7
2527 Male, age 74, both hemispheres 45.0
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 57.6
1963 Male, age 80, left hemisphere 105.7
1892 Male, age 76, both hemispheres 85.3
2437 Female, age 94, left hemisphere 63.1
1940 Female, age 85, left hemisphere 32.0
2113 Female, age 91, right hemisphere 31.4
2249 Male, age 74, both hemispheres 27.8
Hippocampus, CA3
nTPM: 56.1
2861 Female, age 67, both hemispheres 117.4
2137 Male, age 80, left hemisphere 70.3
2620 Female, age 94, left hemisphere 57.7
1867 Male, age 76, both hemispheres 37.5
2436 Male, age 74, both hemispheres 28.7
1891 Female, age 85, both hemispheres 24.8
Parahippocampal cortex
nTPM: 55.0
2622 Female, age 67, right hemisphere 73.3
2245 Female, age 91, both hemispheres 70.1
1933 Female, age 85, both hemispheres 69.8
1850 Male, age 80, both hemispheres 62.7
2692 Male, age 74, both hemispheres 54.0
2693 Female, age 94, both hemispheres 53.8
1990 Female, age 91, right hemisphere 52.8
2532 Female, age 72, left hemisphere 45.9
2250 Female, age 67, right hemisphere 37.6
2018 Male, age 76, both hemispheres 29.6
Perirhinal gyrus
nTPM: 61.1
1847 Female, age 91, left hemisphere 87.1
1794 Male, age 80, right hemisphere 68.2
1841 Female, age 85, right hemisphere 52.1
2848 Male, age 76, right hemisphere 50.0
2521 Female, age 94, right hemisphere 48.3
Subiculum
nTPM: 33.2
1977 Female, age 85, both hemispheres 45.3
1901 Male, age 80, both hemispheres 37.4
2619 Male, age 74, both hemispheres 34.1
2438 Female, age 94, left hemisphere 32.4
2729 Female, age 91, right hemisphere 30.5
2042 Male, age 76, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.7
Samples: 197

Max nTPM: 409.4
Min nTPM: 7.6
Std nTPM: 65.4
Median nTPM: 91.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 409.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 318.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 289.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 268.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 265.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 260.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 239.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 235.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 231.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 216.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 215.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.8
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 45.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 105.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 91.1
Samples: 4

Max nTPM: 138.5
Min nTPM: 59.6
Sample A Female 138.5
Sample B Female 100.4
Sample C Male 65.7
Sample D Male 59.6
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 87.5
Min nTPM: 63.4
Sample A Female 72.8
Sample B Female 63.4
Sample C Male 87.5
Sample D Male 66.4
Subiculum
nTPM: 94.7
Samples: 4

Max nTPM: 121.2
Min nTPM: 71.5
Sample A Female 121.2
Sample B Female 83.5
Sample C Male 102.5
Sample D Male 71.5
Ventral hippocampus
nTPM: 105.6
Samples: 4

Max nTPM: 138.6
Min nTPM: 72.7
Sample A Female 125.8
Sample B Female 72.7
Sample C Male 138.6
Sample D Male 85.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 188.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 166.5
Samples: 4

Max nTPM: 219.3
Min nTPM: 143.6
Sample A Male 143.6
Sample B Male 152.6
Sample C Female 150.3
Sample D Female 219.3
Hippocampal formation
nTPM: 188.4
Samples: 4

Max nTPM: 206.5
Min nTPM: 174.9
Sample A Male 174.9
Sample B Male 190.4
Sample C Female 206.5
Sample D Female 181.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
1640 Antisense, RP_040507_01_G11, Mouse strain C57BL/6J (56 days, male) 6.1
1639 Antisense, RP_040507_01_G11, Mouse strain C57BL/6J (56 days, male) 5.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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