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RPLP2
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  • RPLP2
PATHOLOGY CERVICAL CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
ANTIBODIES
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VALIDATION
Dictionary
Cervical cancer
Human pathology
Cervical cancer
CERVICAL CANCER - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

Read more
RPLP2 is not prognostic in cervical cancer


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

Read more
: 218.02
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

Read more
: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM 384.3
Number of samples 291
Samples
Sample Description FPKM
TCGA-DG-A2KJ-01A 50 years, female, alive, 2893 days 3685.8
TCGA-C5-A1MF-01A 49 years, female, white, alive, 1617 days 2832.4
TCGA-FU-A23K-01A 28 years, female, white, alive, 372 days 2373.2
TCGA-FU-A3EO-01A 55 years, female, white, alive, 490 days 1520.1
TCGA-Q1-A5R3-01A 56 years, female, white, alive, 485 days 1453.0
TCGA-C5-A2LX-01A 54 years, female, white, alive, 2526 days 1452.1
TCGA-C5-A1ME-01A 41 years, female, white, alive, 1756 days 1331.6
TCGA-EA-A3Y4-01A 40 years, female, white, alive, 1122 days 1178.5
TCGA-C5-A1MQ-01A 35 years, female, white, alive, 1031 days 1028.7
TCGA-LP-A5U2-01A 30 years, female, asian, alive, 9 days 1015.4
TCGA-JW-A852-01A 42 years, female, white, dead, 252 days 951.4
TCGA-VS-A8EJ-01A 60 years, female, white, dead, 607 days 947.2
TCGA-DS-A7WI-01A 43 years, female, white, dead, 252 days 837.2
TCGA-C5-A2LT-01A 38 years, female, white, alive, 2226 days 802.5
TCGA-Q1-A73S-01A 33 years, female, white, alive, 688 days 795.4
TCGA-EK-A2PG-01A 89 years, female, black or african american, alive, 46 days 779.4
TCGA-EA-A4BA-01A 49 years, female, white, alive, 755 days 754.8
TCGA-EA-A3QD-01A 59 years, female, white, alive, 397 days 735.6
TCGA-RA-A741-01A 34 years, female, white, alive, 444 days 728.8
TCGA-EK-A2R9-01A 58 years, female, white, alive, 4 days 721.8
TCGA-EK-A2RB-01A 48 years, female, white, alive, 9 days 709.2
TCGA-ZJ-AAXU-01A 51 years, female, white, alive, 5 days 708.0
TCGA-VS-A954-01A 67 years, female, alive, 1714 days 707.0
TCGA-VS-A9V4-01A 63 years, female, white, dead, 132 days 702.6
TCGA-VS-A8EC-01A 55 years, female, white, alive, 1415 days 698.5
TCGA-JX-A3PZ-01A 25 years, female, white, dead, 642 days 692.0
TCGA-C5-A3HE-01A 44 years, female, white, alive, 548 days 672.7
TCGA-DR-A0ZM-01A 61 years, female, white, alive, 1791 days 669.5
TCGA-C5-A7X3-01A 70 years, female, white, dead, 284 days 642.2
TCGA-EK-A2PK-01A 43 years, female, white, alive, 12 days 637.7
TCGA-VS-A8EL-01A 38 years, female, black or african american, alive, 1992 days 628.4
TCGA-HM-A6W2-01A 35 years, female, black or african american, alive, 287 days 609.8
TCGA-C5-A8YQ-01A 79 years, female, white, dead, 715 days 607.7
TCGA-IR-A3LI-01A 48 years, female, white, alive, 2493 days 596.5
TCGA-VS-A953-01A 63 years, female, dead, 477 days 582.0
TCGA-C5-A2LY-01A 30 years, female, white, alive, 2383 days 581.0
TCGA-C5-A7CO-01A 68 years, female, white, alive, 4482 days 565.3
TCGA-ZJ-A8QQ-01A 24 years, female, white, alive, 2056 days 554.4
TCGA-MY-A5BE-01A 42 years, female, black or african american, alive, 1066 days 550.4
TCGA-EX-A1H6-01B 38 years, female, white, alive, 241 days 540.5
TCGA-EK-A2H0-01A 24 years, female, white, alive, 1847 days 540.1
TCGA-EA-A43B-01A 43 years, female, white, alive, 791 days 535.9
TCGA-C5-A7UI-01A 42 years, female, black or african american, dead, 2888 days 531.6
TCGA-UC-A7PD-01A 21 years, female, american indian or alaska native, dead, 355 days 528.2
TCGA-DS-A0VN-01A 47 years, female, white, alive, 2910 days 509.1
TCGA-R2-A69V-01A 42 years, female, white, alive, 596 days 500.0
TCGA-IR-A3LA-01A 60 years, female, white, alive, 4172 days 499.4
TCGA-C5-A2LV-01A 36 years, female, black or african american, alive, 2234 days 497.6
TCGA-2W-A8YY-01A 51 years, female, white, alive, 533 days 490.2
TCGA-EK-A2R8-01A 48 years, female, white, alive, 44 days 482.3
TCGA-JX-A3Q8-01A 40 years, female, asian, alive, 1357 days 482.3
TCGA-C5-A7UC-01A 48 years, female, white, dead, 523 days 481.9
TCGA-IR-A3LL-01A 60 years, female, white, alive, 1106 days 481.9
TCGA-LP-A7HU-01A 53 years, female, asian, alive, 406 days 479.0
TCGA-EA-A556-01A 38 years, female, white, alive, 453 days 478.6
TCGA-VS-A8EI-01A 38 years, female, white, alive, 729 days 472.4
TCGA-EK-A2RC-01A 33 years, female, alive, 129 days 470.0
TCGA-MY-A913-01A 28 years, female, black or african american, alive, 524 days 469.3
TCGA-VS-A8QH-01A 76 years, female, white, dead, 1210 days 463.3
TCGA-EK-A2H1-01A 20 years, female, white, alive, 799 days 462.7
TCGA-DG-A2KH-01A 25 years, female, alive, 34 days 459.5
TCGA-HM-A3JK-01A 64 years, female, white, alive, 632 days 453.5
TCGA-MA-AA41-01A 33 years, female, white, alive, 254 days 448.0
TCGA-C5-A3HF-01A 24 years, female, white, dead, 543 days 444.7
TCGA-C5-A1M9-01A 46 years, female, white, dead, 1065 days 442.1
TCGA-DS-A1OD-01A 49 years, female, white, alive, 3874 days 434.0
TCGA-Q1-A5R2-01A 64 years, female, white, alive, 499 days 429.0
TCGA-PN-A8MA-01A 43 years, female, black or african american, alive, 90 days 422.5
TCGA-GH-A9DA-01A 27 years, female, white, alive, 540 days 422.4
TCGA-EK-A2RK-01A 67 years, female, white, alive, 13 days 420.4
TCGA-MA-AA3W-01A 54 years, female, white, alive, 685 days 417.5
TCGA-VS-A958-01A 46 years, female, white, alive, 1525 days 415.9
TCGA-IR-A3LB-01A 53 years, female, white, dead, 2032 days 415.8
TCGA-VS-A8EB-01A 41 years, female, white, dead, 305 days 413.4
TCGA-LP-A4AW-01A 52 years, female, asian, alive, 27 days 407.8
TCGA-FU-A3HZ-01A 64 years, female, white, alive, 1103 days 407.1
TCGA-EK-A2R7-01A 45 years, female, white, alive, 27 days 405.7
TCGA-EK-A2RO-01A 59 years, female, american indian or alaska native, alive, 2 days 400.7
TCGA-EK-A2IP-01A 28 years, female, white, alive, 202 days 397.6
TCGA-JW-A5VK-01A 43 years, female, black or african american, alive, 623 days 394.4
TCGA-C5-A0TN-01A 21 years, female, black or african american, dead, 348 days 393.7
TCGA-DS-A1OA-01A 77 years, female, asian, dead, 879 days 390.9
TCGA-EK-A2PM-01A 81 years, female, white, alive, 18 days 390.8
TCGA-VS-A9UV-01A 74 years, female, dead, 104 days 388.9
TCGA-VS-A8Q8-01A 26 years, female, white, dead, 978 days 388.5
TCGA-MA-AA42-01A 75 years, female, white, alive, 259 days 388.0
TCGA-C5-A7X8-01A 35 years, female, white, alive, 83 days 387.3
TCGA-C5-A2M1-01A 37 years, female, white, alive, 1169 days 385.3
TCGA-LP-A4AU-01A 35 years, female, asian, alive, 343 days 382.7
TCGA-EK-A2RJ-01A 51 years, female, white, alive, 53 days 382.6
TCGA-C5-A7UE-01A 45 years, female, white, alive, 4738 days 382.4
TCGA-JX-A5QV-01A 37 years, female, white, alive, 636 days 378.8
TCGA-MA-AA3Y-01A 48 years, female, white, alive, 542 days 377.8
TCGA-MU-A5YI-01A 60 years, female, black or african american, alive, 1053 days 377.7
TCGA-EK-A3GJ-01A 51 years, female, native hawaiian or other pacific islander, alive, 3 days 377.3
TCGA-MY-A5BD-01A 62 years, female, white, alive, 1667 days 375.6
TCGA-C5-A1MJ-01A 61 years, female, white, dead, 14 days 375.5
TCGA-C5-A907-01A 47 years, female, white, alive, 448 days 374.1
TCGA-DG-A2KK-01A 51 years, female, alive, 2496 days 373.6
TCGA-EA-A78R-01A 54 years, female, asian, alive, 410 days 370.8
TCGA-BI-A20A-01A 49 years, female, white, alive, 720 days 368.0
TCGA-EX-A8YF-01A 44 years, female, white, alive, 473 days 362.1
TCGA-Q1-A5R1-01A 32 years, female, white, alive, 474 days 361.0
TCGA-VS-AA62-01A 51 years, female, white, dead, 469 days 360.2
TCGA-FU-A40J-01A 38 years, female, white, alive, 426 days 360.0
TCGA-EX-A3L1-01A 32 years, female, white, alive, 463 days 354.9
TCGA-JW-A5VG-01A 35 years, female, american indian or alaska native, alive, 834 days 354.4
TCGA-UC-A7PF-01A 44 years, female, dead, 2859 days 353.1
TCGA-DS-A1OB-01A 45 years, female, white, dead, 861 days 352.8
TCGA-C5-A7CM-01A 35 years, female, white, alive, 619 days 352.3
TCGA-EA-A5O9-01A 39 years, female, white, alive, 788 days 345.6
TCGA-Q1-A73P-01A 45 years, female, white, alive, 483 days 343.9
TCGA-C5-A1M5-01A 53 years, female, white, dead, 2052 days 343.2
TCGA-C5-A8YT-01A 36 years, female, white, dead, 633 days 339.5
TCGA-JW-A5VH-01A 53 years, female, american indian or alaska native, dead, 100 days 339.4
TCGA-VS-A8QM-01A 47 years, female, dead, 951 days 339.1
TCGA-UC-A7PG-01A 44 years, female, white, dead, 370 days 338.3
TCGA-EA-A6QX-01A 49 years, female, asian, alive, 730 days 337.7
TCGA-EX-A449-01A 42 years, female, white, alive, 447 days 336.7
TCGA-ZJ-AAX4-01A 85 years, female, white, alive, 21 days 334.4
TCGA-FU-A57G-01A 49 years, female, white, alive, 1078 days 332.1
TCGA-MA-AA43-01A 48 years, female, white, alive, 346 days 331.8
TCGA-UC-A7PI-01A 45 years, female, white, alive, 2114 days 331.6
TCGA-EA-A5FO-01A 59 years, female, white, alive, 815 days 327.8
TCGA-EA-A410-01A 51 years, female, white, alive, 803 days 323.5
TCGA-EK-A2RL-01A 33 years, female, black or african american, dead, 1453 days 322.9
TCGA-4J-AA1J-01A 31 years, female, white, alive, 542 days 320.5
TCGA-VS-A94W-01A 39 years, female, white, alive, 1243 days 319.2
TCGA-VS-A9UD-01A 73 years, female, white, alive, 739 days 317.8
TCGA-C5-A902-01A 35 years, female, black or african american, alive, 149 days 316.4
TCGA-ZJ-AAXA-01A 64 years, female, white, alive, 43 days 311.9
TCGA-VS-A9UH-01A 53 years, female, black or african american, alive, 1427 days 311.5
TCGA-VS-A94Z-01A 38 years, female, white, alive, 1015 days 311.1
TCGA-C5-A8YR-01A 56 years, female, white, dead, 837 days 308.1
TCGA-EA-A3HS-01A 35 years, female, white, alive, 959 days 307.9
TCGA-Q1-A6DV-01A 36 years, female, asian, alive, 491 days 307.8
TCGA-JX-A3Q0-01A 63 years, female, black or african american, alive, 6375 days 306.5
TCGA-C5-A7CG-01A 55 years, female, white, alive, 6408 days 305.8
TCGA-Q1-A6DT-01A 55 years, female, white, dead, 275 days 305.7
TCGA-HM-A3JJ-01A 40 years, female, black or african american, dead, 659 days 303.5
TCGA-JW-AAVH-01A 46 years, female, white, alive, 552 days 302.3
TCGA-VS-A957-01A 64 years, female, white, alive, 1688 days 302.2
TCGA-ZJ-A8QR-01A 38 years, female, native hawaiian or other pacific islander, dead, 582 days 300.7
TCGA-C5-A905-01A 37 years, female, black or african american, alive, 4879 days 297.3
TCGA-EK-A2RA-01A 74 years, female, alive, 1246 days 295.7
TCGA-DS-A5RQ-01A 80 years, female, white, alive, 512 days 295.0
TCGA-VS-A952-01A 66 years, female, white, alive, 1778 days 293.1
TCGA-VS-A8QC-01A 51 years, female, white, dead, 350 days 292.3
TCGA-C5-A1MK-01A 79 years, female, white, dead, 74 days 291.6
TCGA-JW-A69B-01A 44 years, female, white, alive, 863 days 290.7
TCGA-C5-A8ZZ-01A 41 years, female, white, alive, 636 days 289.9
TCGA-VS-A9UB-01A 54 years, female, alive, 911 days 289.4
TCGA-C5-A1BK-01B 36 years, female, black or african american, alive, 5385 days 287.3
TCGA-EX-A69L-01A 41 years, female, asian, alive, 602 days 285.3
TCGA-C5-A7X5-01A 72 years, female, black or african american, dead, 414 days 285.0
TCGA-C5-A3HD-01B 51 years, female, white, alive, 1582 days 284.6
TCGA-VS-A9UU-01A 42 years, female, alive, 442 days 284.4
TCGA-C5-A1M8-01A 43 years, female, white, alive, 919 days 281.7
TCGA-DS-A7WF-01A 41 years, female, dead, 492 days 280.2
TCGA-C5-A8XK-01A 30 years, female, black or african american, alive, 3039 days 278.4
TCGA-Q1-A73R-01A 45 years, female, white, alive, 567 days 278.3
TCGA-IR-A3LK-01A 69 years, female, white, dead, 908 days 277.2
TCGA-Q1-A73O-01A 37 years, female, alive, 428 days 274.8
TCGA-FU-A2QG-01A 29 years, female, white, alive, 579 days 274.3
TCGA-C5-A8XH-01A 39 years, female, white, dead, 1394 days 274.0
TCGA-IR-A3LC-01A 40 years, female, white, alive, 3935 days 273.8
TCGA-C5-A1MP-01A 34 years, female, black or african american, alive, 109 days 273.7
TCGA-FU-A3HY-01A 47 years, female, white, alive, 954 days 273.4
TCGA-VS-A9UZ-01A 61 years, female, white, alive, 2044 days 273.0
TCGA-DS-A0VM-01A 51 years, female, white, alive, 2128 days 272.6
TCGA-VS-A94X-01A 40 years, female, black or african american, dead, 506 days 267.4
TCGA-MY-A5BF-01A 68 years, female, white, alive, 634 days 266.6
TCGA-DS-A0VL-01A 25 years, female, white, alive, 1692 days 266.6
TCGA-EK-A2PI-01A 44 years, female, white, alive, 586 days 266.3
TCGA-ZX-AA5X-01A 64 years, female, white, alive, 119 days 266.0
TCGA-VS-A9UI-01A 76 years, female, white, dead, 1372 days 265.8
TCGA-EA-A50E-01A 45 years, female, asian, dead, 227 days 264.5
TCGA-VS-A9V5-01A 50 years, female, white, dead, 494 days 264.4
TCGA-C5-A8XI-01A 69 years, female, black or african american, alive, 254 days 264.2
TCGA-MU-A8JM-01A 47 years, female, white, alive, 607 days 264.1
TCGA-JW-A5VL-01A 37 years, female, american indian or alaska native, alive, 474 days 261.6
TCGA-VS-A9UC-01A 32 years, female, alive, 825 days 260.7
TCGA-VS-A9UR-01A 53 years, female, white, alive, 793 days 259.5
TCGA-VS-A8QF-01A 42 years, female, white, alive, 1800 days 259.5
TCGA-VS-A959-01A 76 years, female, alive, 1561 days 258.8
TCGA-IR-A3L7-01A 37 years, female, white, alive, 4483 days 253.9
TCGA-C5-A2LS-01A 37 years, female, white, alive, 1345 days 253.1
TCGA-VS-A8QA-01A 44 years, female, alive, 1099 days 252.1
TCGA-MA-AA3X-01A 50 years, female, black or african american, alive, 595 days 250.5
TCGA-C5-A1BJ-01A 34 years, female, white, alive, 4385 days 250.0
TCGA-C5-A1MN-01A 42 years, female, white, dead, 1245 days 249.4
TCGA-BI-A0VS-01A 48 years, female, white, alive, 1735 days 247.4
TCGA-C5-A7UH-01A 55 years, female, white, alive, 3988 days 246.8
TCGA-C5-A1BI-01B 31 years, female, white, alive, 1112 days 246.7
TCGA-FU-A3NI-01A 45 years, female, white, dead, 638 days 245.6
TCGA-C5-A1BL-01A 32 years, female, white, alive, 5271 days 244.6
TCGA-C5-A1MH-01A 71 years, female, white, dead, 1186 days 244.6
TCGA-EK-A2RN-01A 45 years, female, white, alive, 71 days 243.6
TCGA-VS-A9V0-01A 58 years, female, alive, 573 days 242.9
TCGA-C5-A901-01A 44 years, female, white, alive, 518 days 241.9
TCGA-EA-A3HQ-01A 60 years, female, white, alive, 1136 days 241.6
TCGA-EA-A44S-01A 31 years, female, white, alive, 369 days 241.1
TCGA-VS-A9UM-01A 39 years, female, black or african american, dead, 829 days 240.3
TCGA-VS-A9V2-01A 29 years, female, white, alive, 555 days 238.4
TCGA-EA-A5ZE-01A 54 years, female, asian, alive, 829 days 238.4
TCGA-VS-A8Q9-01A 79 years, female, white, alive, 1630 days 237.9
TCGA-FU-A3TX-01A 78 years, female, alive, 45 days 237.2
TCGA-C5-A7CH-01A 43 years, female, white, alive, 4694 days 236.6
TCGA-IR-A3LF-01A 64 years, female, white, alive, 2949 days 233.3
TCGA-VS-A9U7-01A 30 years, female, white, alive, 1472 days 233.3
TCGA-EK-A2RE-01A 26 years, female, white, alive, 57 days 232.6
TCGA-EK-A2PL-01A 36 years, female, white, alive, 13 days 232.2
TCGA-FU-A23L-01A 60 years, female, white, alive, 725 days 229.5
TCGA-BI-A0VR-01A 53 years, female, white, alive, 1505 days 229.5
TCGA-C5-A2M2-01A 56 years, female, white, dead, 1011 days 229.5
TCGA-EA-A5ZD-01A 40 years, female, asian, alive, 830 days 228.5
TCGA-EK-A3GK-01A 33 years, female, white, alive, 15 days 227.3
TCGA-FU-A770-01A 33 years, female, white, alive, 34 days 226.7
TCGA-VS-A9U6-01A 52 years, female, white, alive, 1320 days 224.3
TCGA-EA-A3HR-01A 57 years, female, white, alive, 940 days 221.6
TCGA-FU-A5XV-01A 32 years, female, white, alive, 321 days 220.5
TCGA-DS-A3LQ-01A 46 years, female, alive, 699 days 218.9
TCGA-EK-A2RM-01A 40 years, female, white, alive, 50 days 218.3
TCGA-C5-A1BE-01B 65 years, female, white, dead, 2094 days 217.7
TCGA-C5-A1BM-01A 78 years, female, black or african american, dead, 2520 days 217.4
TCGA-EK-A2GZ-01A 64 years, female, black or african american, alive, 383 days 217.2
TCGA-MU-A51Y-01A 27 years, female, white, alive, 854 days 216.9
TCGA-JW-A5VJ-01A 56 years, female, american indian or alaska native, alive, 652 days 215.8
TCGA-C5-A7CK-01A 58 years, female, white, dead, 4086 days 215.0
TCGA-FU-A3YQ-01A 35 years, female, white, alive, 861 days 214.6
TCGA-DS-A1O9-01A 75 years, female, white, dead, 266 days 213.5
TCGA-VS-A9U5-01A 57 years, female, white, alive, 1535 days 213.3
TCGA-EK-A2IR-01A 48 years, female, white, alive, 3442 days 212.6
TCGA-VS-A9V3-01A 62 years, female, white, alive, 540 days 212.2
TCGA-IR-A3LH-01A 49 years, female, black or african american, alive, 2394 days 211.9
TCGA-EA-A3HU-01A 43 years, female, white, alive, 1013 days 209.8
TCGA-DG-A2KM-01A 46 years, female, alive, 1946 days 209.3
TCGA-VS-A9UQ-01A 32 years, female, alive, 1263 days 209.2
TCGA-VS-A8EK-01A 65 years, female, white, dead, 829 days 206.1
TCGA-C5-A7CJ-01A 42 years, female, white, dead, 3097 days 206.0
TCGA-VS-A9V1-01A 46 years, female, white, dead, 157 days 205.7
TCGA-C5-A2LZ-01A 65 years, female, white, dead, 3046 days 205.4
TCGA-LP-A4AX-01A 45 years, female, asian, alive, 380 days 204.1
TCGA-VS-A9UJ-01A 55 years, female, dead, 52 days 203.8
TCGA-WL-A834-01A female, white, alive, 791 days 202.2
TCGA-MA-AA3Z-01A 43 years, female, white, alive, 595 days 201.2
TCGA-C5-A1BQ-01C 65 years, female, white, dead, 604 days 200.6
TCGA-C5-A1MI-01A 50 years, female, white, dead, 1083 days 200.2
TCGA-VS-A9UP-01A 43 years, female, alive, 1444 days 198.4
TCGA-JW-A5VI-01A 45 years, female, american indian or alaska native, alive, 747 days 197.3
TCGA-C5-A1BF-01B 46 years, female, white, dead, 570 days 197.0
TCGA-VS-A950-01A 42 years, female, alive, 1221 days 196.6
TCGA-EA-A3QE-01A 45 years, female, white, alive, 761 days 195.5
TCGA-C5-A1M7-01A 37 years, female, white, alive, 1409 days 192.7
TCGA-VS-A9UL-01A 79 years, female, white, dead, 442 days 191.8
TCGA-VS-A94Y-01A 47 years, female, white, dead, 144 days 191.4
TCGA-EX-A69M-01A 62 years, female, white, dead, 253 days 190.6
TCGA-C5-A7XC-01A 26 years, female, white, alive, 1551 days 189.5
TCGA-EA-A97N-01A 38 years, female, white, alive, 11 days 188.5
TCGA-DR-A0ZL-01A 53 years, female, asian, alive, 2669 days 186.7
TCGA-EA-A1QT-01A 47 years, female, white, alive, 1243 days 186.2
TCGA-FU-A3TQ-01A 55 years, female, white, alive, 795 days 186.1
TCGA-HG-A2PA-01A 38 years, female, white, dead, 773 days 185.3
TCGA-VS-A8EG-01A 36 years, female, alive, 1386 days 182.1
TCGA-HM-A4S6-01A 51 years, female, white, alive, 454 days 181.3
TCGA-EA-A5ZF-01A 56 years, female, asian, alive, 828 days 181.2
TCGA-EK-A3GN-01A 47 years, female, white, alive, 27 days 178.7
TCGA-DS-A0VK-01A 46 years, female, white, dead, 1118 days 177.6
TCGA-Q1-A73Q-01A 46 years, female, white, alive, 284 days 177.4
TCGA-EA-A1QS-01A 46 years, female, white, alive, 1203 days 176.1
TCGA-EA-A411-01A 50 years, female, white, alive, 747 days 173.8
TCGA-C5-A1BN-01B 26 years, female, white, dead, 166 days 173.7
TCGA-DS-A7WH-01A 34 years, female, white, alive, 533 days 171.5
TCGA-VS-A9UY-01A 29 years, female, dead, 555 days 169.1
TCGA-XS-A8TJ-01A 41 years, female, black or african american, alive, 890 days 168.8
TCGA-C5-A1ML-01A 49 years, female, white, dead, 636 days 164.7
TCGA-EX-A1H5-01A 58 years, female, black or african american, alive, 619 days 160.8
TCGA-VS-A9UT-01A 72 years, female, asian, alive, 482 days 160.4
TCGA-EA-A439-01A 50 years, female, asian, alive, 965 days 159.3
TCGA-DG-A2KL-01A 53 years, female, alive, 1367 days 153.4
TCGA-VS-A8EH-01A 56 years, female, alive, 986 days 151.3
TCGA-EA-A3HT-01A 68 years, female, white, alive, 954 days 148.8
TCGA-VS-A9UO-01A 43 years, female, white, alive, 1456 days 148.3
TCGA-FU-A3WB-01A 43 years, female, white, alive, 491 days 144.1
TCGA-LP-A5U3-01A 40 years, female, asian, alive, 25 days 140.9
TCGA-C5-A3HL-01A 76 years, female, white, alive, 621 days 132.4
TCGA-C5-A1M6-01A 55 years, female, white, dead, 955 days 132.2
TCGA-DS-A1OC-01A 47 years, female, white, alive, 376 days 126.6
TCGA-C5-A8XJ-01A 74 years, female, white, alive, 4467 days 114.7
TCGA-C5-A7CL-01A 48 years, female, white, dead, 471 days 113.8
TCGA-Q1-A6DW-01A 44 years, female, white, alive, 534 days 97.4
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CERVICAL CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more

Antibody HPA053635
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Click images for details

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.