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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1204.8 nTPM
HPA:1204.8 nTPM
GTEx:726.8 nTPM
FANTOM5:1198.9 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1204.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1119.8
1981 Female, age 72, midline 1211.4
2565 Male, age 75, midline 1137.4
2194 Female, age 79, both hemispheres 1095.5
2048 Male, age 55, midline 1083.2
2816 Male, age 47, midline 1071.4
Cervical spinal cord, dorsal horn
nTPM: 1134.7
2173 Female, age 72, unknown 1245.4
2069 Male, age 47, both hemispheres 1201.0
2296 Male, age 66, both hemispheres 1185.6
1877 Male, age 55, unknown 1128.9
2721 Male, age 90, both hemispheres 1030.6
2297 Male, age 75, both hemispheres 1016.8
Cervical spinal cord, ventral horn
nTPM: 1204.8
2480 Male, age 75, both hemispheres 1327.3
2098 Female, age 72, unknown 1300.8
2809 Male, age 90, both hemispheres 1300.1
2068 Male, age 55, unknown 1161.6
2295 Male, age 66, both hemispheres 1111.5
2820 Female, age 79, both hemispheres 1027.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 726.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 726.8
Samples: 159

Max nTPM: 1394.5
Min nTPM: 251.4
Std nTPM: 224.0
Median nTPM: 693.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1394.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1338.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1333.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1333.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1313.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1188.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1180.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1159.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1123.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1121.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1110.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1103.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1101.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1040.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1033.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1021.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1019.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1007.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 990.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 989.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 986.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 979.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 977.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 973.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 971.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 962.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 959.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 951.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 944.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 941.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 930.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 927.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 926.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 918.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 901.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 892.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 886.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 885.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 884.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 875.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 865.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 852.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 849.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 845.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 838.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 838.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 835.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 819.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 817.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 790.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 787.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 781.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 779.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 771.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 770.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 759.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 757.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 756.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 754.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 746.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 745.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 735.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 732.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 732.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 731.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 730.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 729.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 729.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 723.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 722.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 717.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 716.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 710.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 708.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 707.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 705.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 701.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 698.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 698.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 693.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 690.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 688.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 686.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 683.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 682.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 680.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 678.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 660.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 658.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 657.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 653.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 652.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 648.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 647.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 638.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 634.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 630.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 628.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 628.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 623.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 617.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 614.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 611.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 609.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 606.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 605.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 604.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 598.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 595.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 593.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 588.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 585.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 584.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 581.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 576.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 572.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 566.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 563.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 562.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 560.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 559.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 558.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 555.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 555.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 550.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 549.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 549.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 543.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 537.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 536.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 534.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 534.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 533.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 525.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 519.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 517.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 515.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 513.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 511.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 507.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 496.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 493.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 485.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 480.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 464.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 454.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 451.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 444.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 437.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 436.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 420.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 407.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 404.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 394.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 382.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 375.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 345.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 298.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 251.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1198.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1198.9
FF:10181-103D1 60 years, female 1465.0
FF:10159-103A6 76 years, female 932.7

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