HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:10.8 nTPM
HPA:10.8 nTPM
GTEx:13.5 nTPM
FANTOM5:18.2 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:11.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039947Antibody HPA041715
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.8
Sample id Sample description nTPM
Hippocampus
nTPM: 6.2
2621 Female, age 67, right hemisphere 9.0
1898 Male, age 80, left hemisphere 7.9
2529 Female, age 94, left hemisphere 6.3
1911 Female, age 85, right hemisphere 5.4
2148 Female, age 91, left hemisphere 4.7
1855 Male, age 76, left hemisphere 4.3
Dentate gyrus
nTPM: 6.4
2528 Male, age 74, both hemispheres 7.8
1927 Female, age 91, both hemispheres 7.4
2246 Female, age 85, both hemispheres 6.2
2531 Female, age 67, both hemispheres 6.1
2010 Male, age 76, both hemispheres 5.7
2530 Female, age 94, left hemisphere 5.3
Entorhinal gyrus
nTPM: 9.7
2613 Female, age 94, left hemisphere 16.6
2764 Male, age 80, right hemisphere 11.7
1787 Male, age 76, left hemisphere 9.3
1938 Female, age 85, left hemisphere 8.8
2686 Male, age 75, right hemisphere 7.6
2117 Female, age 91, right hemisphere 4.2
Hippocampus, CA1
nTPM: 8.2
2749 Male, age 80, left hemisphere 15.7
2527 Male, age 74, both hemispheres 8.4
1873 Female, age 85, both hemispheres 6.1
2045 Male, age 76, both hemispheres 6.1
2082 Female, age 91, right hemisphere 4.7
Hippocampus, CA2
nTPM: 7.0
1892 Male, age 76, both hemispheres 11.1
2437 Female, age 94, left hemisphere 7.7
2249 Male, age 74, both hemispheres 7.5
1963 Male, age 80, left hemisphere 7.2
2113 Female, age 91, right hemisphere 4.8
1940 Female, age 85, left hemisphere 3.4
Hippocampus, CA3
nTPM: 8.3
2137 Male, age 80, left hemisphere 11.5
1867 Male, age 76, both hemispheres 10.9
2861 Female, age 67, both hemispheres 8.0
2620 Female, age 94, left hemisphere 6.8
2436 Male, age 74, both hemispheres 6.4
1891 Female, age 85, both hemispheres 6.0
Parahippocampal cortex
nTPM: 9.1
2693 Female, age 94, both hemispheres 11.4
2250 Female, age 67, right hemisphere 11.2
1990 Female, age 91, right hemisphere 10.3
2245 Female, age 91, both hemispheres 9.8
1850 Male, age 80, both hemispheres 9.1
1933 Female, age 85, both hemispheres 9.0
2532 Female, age 72, left hemisphere 9.0
2622 Female, age 67, right hemisphere 7.5
2018 Male, age 76, both hemispheres 7.1
2692 Male, age 74, both hemispheres 6.5
Perirhinal gyrus
nTPM: 10.8
1847 Female, age 91, left hemisphere 12.1
2521 Female, age 94, right hemisphere 12.0
1794 Male, age 80, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.8
2848 Male, age 76, right hemisphere 8.4
Subiculum
nTPM: 7.1
1977 Female, age 85, both hemispheres 9.8
2438 Female, age 94, left hemisphere 8.8
2619 Male, age 74, both hemispheres 8.8
1901 Male, age 80, both hemispheres 7.7
2042 Male, age 76, both hemispheres 4.1
2729 Female, age 91, right hemisphere 3.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 43.5
Min nTPM: 2.0
Std nTPM: 8.3
Median nTPM: 11.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 43.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 41.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 31.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 31.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 30.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 30.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 29.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.2
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 14.3
Min nTPM: 5.6
Sample A Female 13.4
Sample B Female 10.9
Sample C Male 14.3
Sample D Male 5.6
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 16.1
Min nTPM: 14.9
Sample A Female 16.1
Sample B Female 14.9
Sample C Male 16.0
Sample D Male 15.0
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 12.7
Sample A Female 20.5
Sample B Female 12.7
Sample C Male 13.3
Sample D Male 12.8
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 19.4
Min nTPM: 10.6
Sample A Female 13.2
Sample B Female 10.6
Sample C Male 19.4
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.8
Samples: 4

Max nTPM: 14.5
Min nTPM: 9.0
Sample A Male 14.0
Sample B Male 14.5
Sample C Female 9.8
Sample D Female 9.0
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.4
Sample A Male 7.4
Sample B Male 6.4
Sample C Female 6.4
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71250313 Antisense, RP_050419_04_G05, Mouse strain C57BL/6J (56 days, male) 1.2
69526408 Antisense, RP_050419_04_G05, Mouse strain C57BL/6J (56 days, male) 0.9
77793207 Antisense, RP_070212_03_A05, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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