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GRB2
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  • GRB2
PROTEIN STRUCTURE
ANTIBODIES
AND
VALIDATION
Protein structures
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GRB2
Synonyms NCKAP2
Gene descriptioni

Full gene name according to HGNC.

Growth factor receptor bound protein 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Read more
Cancer-related genes
Plasma proteins
RAS pathway related proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Read more
Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q25.1
Chromosome location (bp) 75318076 - 75405709
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000177885 (version 103.38)
Entrez gene 2885
HGNC HGNC:4566
UniProt P62993 (UniProt - Evidence at protein level)
neXtProt NX_P62993
Antibodypedia GRB2 antibodies


PROTEIN STRUCTUREi

The Structure section provides predicted structures from the Alphafold protein structure database and available experimental structures from Protein Data Bank (PDB).

In the Structure drop-down menu all experimental structures from PDB are available for selection and display. The structures are displayed using the NGL Viewer and can be zoomed-in and rotated either manually or by checking the Autorotate box. The Color scheme can be selected to show the residue index, chain name or confidence score (as B-factors and pLDDT score for experimental and predicted structures, respectively). The positions for available antigen sequences in the structure are shown if Antigens is turned to ON, and the Variants slider can be used to show the positions of clinical and population variants.https://github.com/nglviewer/ngl

Read more

Predicted


Description: Structure prediction from Alphafold project. Structure version 2

# Chains: 1      # Clinical variants: 0      # Population variants: 57

Experimental


Description: GRB2 (X-ray)

# Chains: 1      # Clinical variants: 0      # Population variants: 57

Antigens:

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On

Variants:

Off
Clinical
Population

Color scheme:

Confidence
Residue index
Chain name

Autorotate:

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On



PROTEIN BROWSERi

The protein browser displays the antigen location on the target protein(s) and the features of the target protein. The tabs at the top of the protein view section can be used to switch between the different splice variants to which an antigen has been mapped.

At the top of the view, the position of the antigen (identified by the corresponding HPA identifier) is shown as a green bar. A yellow triangle on the bar indicates a <100% sequence identity to the protein target.

Below the antigens, the maximum percent sequence identity of the protein to all other proteins from other human genes is displayed, using a sliding window of 10 aa residues (HsID 10) or 50 aa residues (HsID 50). The region with the lowest possible identity is always selected for antigen design, with a maximum identity of 60% allowed for designing a single-target antigen (read more).

The curve in blue displays the predicted antigenicity i.e. the tendency for different regions of the protein to generate an immune response, with peak regions being predicted to be more antigenic.The curve shows average values based on a sliding window approach using an in-house propensity scale. (read more).

If a signal peptide is predicted by a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius (turquoise) and/or transmembrane regions (orange) are predicted by MDM, these are displayed.

Low complexity regions are shown in yellow and InterPro regions in green. Common (purple) and unique (grey) regions between different splice variants of the gene are also displayed (read more), and at the bottom of the protein view is the protein scale.
GRB2-201
GRB2-202
GRB2-203
GRB2-204
GRB2-205
GRB2-208
GRB2-209
GRB2-210


PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant UniProt Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GRB2-201
ENSP00000317360
ENST00000316615
P62993 [Direct mapping]
Growth factor receptor-bound protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0003723 [RNA binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005168 [neurotrophin TRKA receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0007265 [Ras protein signal transduction]
GO:0007411 [axon guidance]
GO:0008180 [COP9 signalosome]
GO:0008286 [insulin receptor signaling pathway]
GO:0008543 [fibroblast growth factor receptor signaling pathway]
GO:0016032 [viral process]
GO:0017124 [SH3 domain binding]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019901 [protein kinase binding]
GO:0031295 [T cell costimulation]
GO:0031532 [actin cytoskeleton reorganization]
GO:0031623 [receptor internalization]
GO:0035635 [entry of bacterium into host cell]
GO:0035723 [interleukin-15-mediated signaling pathway]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0038096 [Fc-gamma receptor signaling pathway involved in phagocytosis]
GO:0038128 [ERBB2 signaling pathway]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0042770 [signal transduction in response to DNA damage]
GO:0042802 [identical protein binding]
GO:0043560 [insulin receptor substrate binding]
GO:0046579 [positive regulation of Ras protein signal transduction]
GO:0046875 [ephrin receptor binding]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0050900 [leukocyte migration]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0070436 [Grb2-EGFR complex]
GO:0071479 [cellular response to ionizing radiation]
GO:2000379 [positive regulation of reactive oxygen species metabolic process]
Show all
176 aa
20.6 kDa
No 0
GRB2-202
ENSP00000339007
ENST00000316804
P62993 [Direct mapping]
Growth factor receptor-bound protein 2
B0LPF3 [Target identity:100%; Query identity:100%]
Adapter protein GRB2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0003723 [RNA binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005168 [neurotrophin TRKA receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0007265 [Ras protein signal transduction]
GO:0007411 [axon guidance]
GO:0008180 [COP9 signalosome]
GO:0008286 [insulin receptor signaling pathway]
GO:0008543 [fibroblast growth factor receptor signaling pathway]
GO:0016032 [viral process]
GO:0017124 [SH3 domain binding]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019901 [protein kinase binding]
GO:0031295 [T cell costimulation]
GO:0031532 [actin cytoskeleton reorganization]
GO:0031623 [receptor internalization]
GO:0035635 [entry of bacterium into host cell]
GO:0035723 [interleukin-15-mediated signaling pathway]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0038096 [Fc-gamma receptor signaling pathway involved in phagocytosis]
GO:0038128 [ERBB2 signaling pathway]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0042770 [signal transduction in response to DNA damage]
GO:0042802 [identical protein binding]
GO:0043560 [insulin receptor substrate binding]
GO:0046579 [positive regulation of Ras protein signal transduction]
GO:0046875 [ephrin receptor binding]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0050900 [leukocyte migration]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0070436 [Grb2-EGFR complex]
GO:0071479 [cellular response to ionizing radiation]
GO:2000379 [positive regulation of reactive oxygen species metabolic process]
Show all
217 aa
25.2 kDa
No 0
GRB2-203
ENSP00000376345
ENST00000392562
P62993 [Direct mapping]
Growth factor receptor-bound protein 2
B0LPF3 [Target identity:100%; Query identity:100%]
Adapter protein GRB2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0003723 [RNA binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005168 [neurotrophin TRKA receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005911 [cell-cell junction]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0007265 [Ras protein signal transduction]
GO:0007411 [axon guidance]
GO:0007568 [aging]
GO:0008180 [COP9 signalosome]
GO:0008286 [insulin receptor signaling pathway]
GO:0008543 [fibroblast growth factor receptor signaling pathway]
GO:0012506 [vesicle membrane]
GO:0016020 [membrane]
GO:0016032 [viral process]
GO:0017124 [SH3 domain binding]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019899 [enzyme binding]
GO:0019901 [protein kinase binding]
GO:0019903 [protein phosphatase binding]
GO:0019904 [protein domain specific binding]
GO:0030154 [cell differentiation]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0031295 [T cell costimulation]
GO:0031532 [actin cytoskeleton reorganization]
GO:0031623 [receptor internalization]
GO:0032991 [protein-containing complex]
GO:0035635 [entry of bacterium into host cell]
GO:0035723 [interleukin-15-mediated signaling pathway]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0038096 [Fc-gamma receptor signaling pathway involved in phagocytosis]
GO:0038128 [ERBB2 signaling pathway]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0042770 [signal transduction in response to DNA damage]
GO:0042802 [identical protein binding]
GO:0043408 [regulation of MAPK cascade]
GO:0043560 [insulin receptor substrate binding]
GO:0044877 [protein-containing complex binding]
GO:0046579 [positive regulation of Ras protein signal transduction]
GO:0046875 [ephrin receptor binding]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0048646 [anatomical structure formation involved in morphogenesis]
GO:0050900 [leukocyte migration]
GO:0051219 [phosphoprotein binding]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0060670 [branching involved in labyrinthine layer morphogenesis]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0070436 [Grb2-EGFR complex]
GO:0071479 [cellular response to ionizing radiation]
GO:2000379 [positive regulation of reactive oxygen species metabolic process]
Show all
217 aa
25.2 kDa
No 0
GRB2-204
ENSP00000376346
ENST00000392563
P62993 [Direct mapping]
Growth factor receptor-bound protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0003723 [RNA binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005168 [neurotrophin TRKA receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0007265 [Ras protein signal transduction]
GO:0007411 [axon guidance]
GO:0008180 [COP9 signalosome]
GO:0008286 [insulin receptor signaling pathway]
GO:0008543 [fibroblast growth factor receptor signaling pathway]
GO:0016032 [viral process]
GO:0017124 [SH3 domain binding]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019901 [protein kinase binding]
GO:0031295 [T cell costimulation]
GO:0031532 [actin cytoskeleton reorganization]
GO:0031623 [receptor internalization]
GO:0035635 [entry of bacterium into host cell]
GO:0035723 [interleukin-15-mediated signaling pathway]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0038096 [Fc-gamma receptor signaling pathway involved in phagocytosis]
GO:0038128 [ERBB2 signaling pathway]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0042770 [signal transduction in response to DNA damage]
GO:0042802 [identical protein binding]
GO:0043560 [insulin receptor substrate binding]
GO:0046579 [positive regulation of Ras protein signal transduction]
GO:0046875 [ephrin receptor binding]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0050900 [leukocyte migration]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0070436 [Grb2-EGFR complex]
GO:0071479 [cellular response to ionizing radiation]
GO:2000379 [positive regulation of reactive oxygen species metabolic process]
Show all
176 aa
20.6 kDa
No 0
GRB2-205
ENSP00000376347
ENST00000392564
P62993 [Direct mapping]
Growth factor receptor-bound protein 2
B0LPF3 [Target identity:100%; Query identity:100%]
Adapter protein GRB2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001784 [phosphotyrosine residue binding]
GO:0003723 [RNA binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005168 [neurotrophin TRKA receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0007265 [Ras protein signal transduction]
GO:0007411 [axon guidance]
GO:0008180 [COP9 signalosome]
GO:0008286 [insulin receptor signaling pathway]
GO:0008543 [fibroblast growth factor receptor signaling pathway]
GO:0016032 [viral process]
GO:0017124 [SH3 domain binding]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019901 [protein kinase binding]
GO:0031295 [T cell costimulation]
GO:0031532 [actin cytoskeleton reorganization]
GO:0031623 [receptor internalization]
GO:0035635 [entry of bacterium into host cell]
GO:0035723 [interleukin-15-mediated signaling pathway]
GO:0038095 [Fc-epsilon receptor signaling pathway]
GO:0038096 [Fc-gamma receptor signaling pathway involved in phagocytosis]
GO:0038128 [ERBB2 signaling pathway]
GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway]
GO:0042770 [signal transduction in response to DNA damage]
GO:0042802 [identical protein binding]
GO:0043560 [insulin receptor substrate binding]
GO:0046579 [positive regulation of Ras protein signal transduction]
GO:0046875 [ephrin receptor binding]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
GO:0050900 [leukocyte migration]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0070436 [Grb2-EGFR complex]
GO:0071479 [cellular response to ionizing radiation]
GO:2000379 [positive regulation of reactive oxygen species metabolic process]
Show all
217 aa
25.2 kDa
No 0
GRB2-208
ENSP00000464279
ENST00000578961
J3QRL5 [Direct mapping]
Growth factor receptor-bound protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
Show all
156 aa
17.6 kDa
No 0
GRB2-209
ENSP00000463525
ENST00000581959
J3QLF6 [Direct mapping]
Growth factor receptor-bound protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
42 aa
4.7 kDa
No 0
GRB2-210
ENSP00000462785
ENST00000582582
J3KT38 [Direct mapping]
Growth factor receptor-bound protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005794 [Golgi apparatus]
Show all
110 aa
12.7 kDa
No 0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.