HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.5 nTPM
HPA:39.5 nTPM
GTEx:38.9 nTPM
FANTOM5:57.2 Scaled Tags Per Million
Mouse:64.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001400Antibody CAB020717
Glial cells MediumLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.3
2529 Female, age 94, left hemisphere 41.3
1898 Male, age 80, left hemisphere 40.1
2621 Female, age 67, right hemisphere 38.1
1855 Male, age 76, left hemisphere 36.8
1911 Female, age 85, right hemisphere 36.8
2148 Female, age 91, left hemisphere 36.7
Dentate gyrus
nTPM: 38.4
2530 Female, age 94, left hemisphere 41.2
2010 Male, age 76, both hemispheres 40.0
2528 Male, age 74, both hemispheres 38.7
2246 Female, age 85, both hemispheres 38.1
2531 Female, age 67, both hemispheres 37.1
1927 Female, age 91, both hemispheres 35.5
Entorhinal gyrus
nTPM: 39.5
2117 Female, age 91, right hemisphere 40.9
1787 Male, age 76, left hemisphere 39.9
1938 Female, age 85, left hemisphere 39.7
2764 Male, age 80, right hemisphere 39.7
2686 Male, age 75, right hemisphere 38.9
2613 Female, age 94, left hemisphere 37.8
Hippocampus, CA1
nTPM: 37.5
2527 Male, age 74, both hemispheres 38.8
2082 Female, age 91, right hemisphere 38.2
1873 Female, age 85, both hemispheres 37.4
2045 Male, age 76, both hemispheres 37.3
2749 Male, age 80, left hemisphere 35.9
Hippocampus, CA2
nTPM: 38.1
2249 Male, age 74, both hemispheres 39.6
1892 Male, age 76, both hemispheres 38.2
1963 Male, age 80, left hemisphere 38.2
2437 Female, age 94, left hemisphere 37.6
2113 Female, age 91, right hemisphere 37.5
1940 Female, age 85, left hemisphere 37.3
Hippocampus, CA3
nTPM: 37.0
1867 Male, age 76, both hemispheres 38.7
1891 Female, age 85, both hemispheres 37.8
2436 Male, age 74, both hemispheres 37.6
2861 Female, age 67, both hemispheres 36.5
2620 Female, age 94, left hemisphere 35.9
2137 Male, age 80, left hemisphere 35.2
Parahippocampal cortex
nTPM: 37.8
2250 Female, age 67, right hemisphere 39.4
1850 Male, age 80, both hemispheres 39.2
2018 Male, age 76, both hemispheres 39.2
1933 Female, age 85, both hemispheres 38.6
1990 Female, age 91, right hemisphere 38.5
2532 Female, age 72, left hemisphere 38.3
2692 Male, age 74, both hemispheres 37.2
2245 Female, age 91, both hemispheres 36.5
2693 Female, age 94, both hemispheres 36.0
2622 Female, age 67, right hemisphere 35.4
Perirhinal gyrus
nTPM: 38.7
1794 Male, age 80, right hemisphere 40.3
1847 Female, age 91, left hemisphere 39.1
2521 Female, age 94, right hemisphere 38.7
1841 Female, age 85, right hemisphere 38.3
2848 Male, age 76, right hemisphere 37.3
Subiculum
nTPM: 38.8
1977 Female, age 85, both hemispheres 40.7
2619 Male, age 74, both hemispheres 39.5
2042 Male, age 76, both hemispheres 39.3
2729 Female, age 91, right hemisphere 38.3
1901 Male, age 80, both hemispheres 38.0
2438 Female, age 94, left hemisphere 36.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 98.5
Min nTPM: 22.5
Std nTPM: 9.9
Median nTPM: 37.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 98.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 83.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 75.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 73.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 62.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 60.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 60.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 59.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 58.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 57.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 56.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.2
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 64.9
Min nTPM: 51.4
Sample A Male 51.4
Sample B Male 54.4
Sample C Female 64.9
Sample D Female 54.1
Hippocampal formation
nTPM: 64.3
Samples: 4

Max nTPM: 66.6
Min nTPM: 62.3
Sample A Male 66.6
Sample B Male 63.8
Sample C Female 64.3
Sample D Female 62.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.