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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 0.9
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
0.9
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
0.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
0.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
0.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
0.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
0.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
0.7
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
0.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
0.6
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
0.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
0.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
0.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
0.5
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
0.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
0.5
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
0.5
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
0.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
0.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
0.4
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
0.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
0.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
0.4
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
0.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
0.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
0.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
0.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
0.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
0.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
0.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
0.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
0.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
0.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
0.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
0.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
0.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
0.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
0.3
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
0.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
0.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
0.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
0.3
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
0.3
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
0.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
0.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
0.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
0.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
0.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
0.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
0.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
0.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
0.2
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
0.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
0.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
0.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
0.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
0.2
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
0.2
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
0.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
0.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
0.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
0.2
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
0.2
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
0.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
0.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
0.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
0.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
0.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
0.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
0.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
0.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
0.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
0.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
0.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
0.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
0.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
0.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
0.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
0.1
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
0.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
0.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
0.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
0.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
0.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
0.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
0.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
0.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
0.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
0.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
0.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
0.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
0.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
0.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
0.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
0.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
0.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
0.1
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
0.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
0.1
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
0.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
0.1
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
0.1
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
0.1
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
0.1
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
0.1
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
0.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
0.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
0.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
0.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
0.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
0.0
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
0.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
0.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
0.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
0.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
0.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
0.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
0.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
0.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
0.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
0.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
0.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
0.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
0.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
0.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
0.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
0.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
0.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
0.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
0.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
0.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
0.0
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
0.0
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
0.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
0.0
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
0.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
0.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
0.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
0.0
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
0.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
0.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
0.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
0.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
0.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
0.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
0.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
0.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
0.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
0.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
0.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
0.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
0.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
0.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
0.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
0.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
0.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
0.0
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
0.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
0.0
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
0.0
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
0.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
0.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
0.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
0.0
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
0.0
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
0.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
0.0
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
0.0
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
0.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
0.0
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
0.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
0.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
0.0
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
0.0
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
0.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
0.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
0.0
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
0.0
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
0.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
0.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
0.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
0.0
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
0.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
0.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
0.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
0.0
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
0.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
0.0
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
0.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
0.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
0.0
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
0.0
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
0.0
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
0.0
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
0.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
0.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
0.0
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
0.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.