PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:108.1 nTPM
HPA:108.1 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:81.4 nTPM
Allen mouse:7.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 108.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 101.2
2090 Male, age 80, both hemispheres 103.4
2188 Female, age 91, both hemispheres 101.3
2301 Female, age 85, both hemispheres 100.2
1984 Male, age 76, both hemispheres 99.9
Area postrema
nTPM: 103.3
2054 Male, age 76, both hemispheres 104.1
2306 Male, age 80, both hemispheres 102.9
2799 Male, age 61, both hemispheres 102.9
Cuneate nuclei
nTPM: 99.7
2381 Male, age 80, both hemispheres 101.3
2131 Male, age 76, both hemispheres 100.2
2376 Male, age 61, both hemispheres 97.8
Dorsal cochlear nucleus
nTPM: 100.3
2058 Male, age 76, both hemispheres 101.7
2187 Female, age 91, both hemispheres 101.5
2378 Male, age 80, both hemispheres 100.7
2802 Male, age 74, right hemisphere 98.9
2370 Male, age 61, both hemispheres 98.8
Dorsal medullary reticular nucleus
nTPM: 101.2
2040 Female, age 85, both hemispheres 103.4
2088 Male, age 76, both hemispheres 100.9
2373 Male, age 61, both hemispheres 99.2
Dorsal motor vagal complex
nTPM: 103.5
2844 Male, age 55, unknown 111.9
2813 Female, age 72, unknown 109.5
2643 Male, age 74, both hemispheres 104.0
2000 Male, age 74, unknown 102.2
2807 Female, age 85, both hemispheres 101.5
2185 Male, age 76, both hemispheres 101.0
2133 Female, age 91, both hemispheres 99.4
2797 Male, age 61, both hemispheres 98.2
Dorsal tegmental nucleus
nTPM: 103.0
2358 Male, age 61, both hemispheres 104.7
1936 Male, age 76, left hemisphere 103.6
2083 Male, age 80, both hemispheres 102.3
2326 Male, age 74, both hemispheres 101.5
Dorsolateral tegmental area
nTPM: 106.0
2141 Male, age 76, both hemispheres 111.3
2751 Female, age 85, both hemispheres 107.2
2360 Male, age 74, both hemispheres 106.1
2337 Male, age 61, both hemispheres 106.0
2654 Male, age 80, both hemispheres 99.7
Gigantocellular reticular nuclei, medullary
nTPM: 99.6
1876 Female, age 85, both hemispheres 105.2
2022 Male, age 76, right hemisphere 100.1
2310 Male, age 80, both hemispheres 100.0
2314 Male, age 61, both hemispheres 99.4
2462 Male, age 74, both hemispheres 96.6
2387 Female, age 91, both hemispheres 96.5
Gigantocellular reticular nuclei, pars
nTPM: 101.2
2084 Female, age 85, both hemispheres 105.2
2706 Male, age 80, both hemispheres 103.6
2330 Male, age 80, both hemispheres 101.5
2336 Male, age 61, both hemispheres 98.7
2168 Male, age 76, both hemispheres 97.1
Inferior olive
nTPM: 101.6
2563 Male, age 74, both hemispheres 104.2
2628 Female, age 91, both hemispheres 104.1
2379 Male, age 80, both hemispheres 100.9
2085 Female, age 85, both hemispheres 99.5
2178 Male, age 61, both hemispheres 99.2
Kolliker-Fuse nucleus
nTPM: 101.5
2793 Female, age 91, left hemisphere 104.0
2315 Male, age 76, right hemisphere 101.6
2163 Male, age 80, both hemispheres 98.9
Lateral lemniscal nuclei
nTPM: 98.6
2746 Female, age 85, left hemisphere 100.1
2320 Female, age 91, left hemisphere 99.4
2036 Male, age 80, both hemispheres 99.1
2453 Male, age 74, right hemisphere 98.7
2169 Male, age 76, both hemispheres 95.8
Lateral medullary reticular nucleus
nTPM: 101.7
2852 Male, age 80, both hemispheres 106.5
2305 Male, age 74, both hemispheres 102.5
2374 Male, age 61, both hemispheres 101.7
2804 Female, age 91, both hemispheres 101.3
2190 Female, age 85, both hemispheres 100.7
2044 Male, age 76, both hemispheres 97.7
Lateral parabrachial nucleus
nTPM: 101.7
2792 Male, age 76, both hemispheres 104.3
2013 Male, age 80, both hemispheres 101.6
2790 Male, age 61, both hemispheres 100.7
2139 Female, age 85, right hemisphere 100.1
Lateral vestibular nucleus
nTPM: 100.2
2311 Male, age 80, both hemispheres 100.7
2184 Male, age 76, both hemispheres 99.7
Locus coeruleus
nTPM: 108.1
2014 Male, age 55, unknown 113.7
1980 Male, age 76, both hemispheres 113.1
2788 Male, age 74, unknown 107.9
2123 Female, age 91, both hemispheres 107.1
2317 Female, age 72, unknown 107.0
2720 Male, age 74, both hemispheres 104.6
2162 Male, age 80, both hemispheres 103.3
Medial olivary nucleus
nTPM: 104.6
1943 Male, age 61, both hemispheres 105.4
2138 Female, age 91, both hemispheres 104.7
2851 Male, age 80, both hemispheres 104.3
1962 Male, age 76, both hemispheres 104.1
Medial parabrachial nucleus
nTPM: 103.6
2463 Female, age 85, right hemisphere 106.6
2170 Female, age 91, both hemispheres 105.5
2786 Male, age 76, both hemispheres 104.8
2854 Male, age 80, both hemispheres 101.4
2156 Male, age 61, both hemispheres 99.8
Medial periolivary nuclei
nTPM: 99.1
2081 Male, age 80, both hemispheres 102.0
2791 Male, age 74, right hemisphere 101.1
2458 Female, age 91, both hemispheres 100.6
2171 Female, age 85, both hemispheres 96.4
2063 Male, age 76, both hemispheres 95.3
Medial vestibular nucleus
nTPM: 101.0
2743 Female, age 85, both hemispheres 104.6
2801 Male, age 74, both hemispheres 104.1
2134 Male, age 76, both hemispheres 102.0
2093 Male, age 80, both hemispheres 100.5
2803 Female, age 91, both hemispheres 98.3
2624 Male, age 61, both hemispheres 96.6
Motor facial nucleus
nTPM: 99.1
2697 Female, age 85, both hemispheres 101.0
2327 Male, age 80, both hemispheres 100.0
2795 Female, age 91, both hemispheres 99.5
2365 Male, age 74, right hemisphere 99.1
2126 Male, age 61, both hemispheres 98.1
2062 Male, age 76, both hemispheres 96.6
Motor hypoglossal nucleus
nTPM: 102.0
2277 Male, age 76, both hemispheres 105.5
2182 Male, age 80, both hemispheres 104.9
2461 Male, age 61, both hemispheres 101.4
2132 Female, age 85, both hemispheres 99.9
2125 Female, age 91, both hemispheres 98.4
Motor trigeminal nucleus
nTPM: 101.5
2321 Female, age 91, both hemispheres 103.7
2335 Male, age 61, both hemispheres 102.3
2079 Male, age 80, both hemispheres 101.2
2309 Male, age 76, both hemispheres 101.2
2560 Male, age 74, both hemispheres 98.9
Nuclei of the trapezoid body
nTPM: 97.5
2166 Male, age 80, both hemispheres 100.8
2159 Male, age 61, both hemispheres 97.8
1983 Male, age 76, both hemispheres 96.4
2735 Female, age 85, both hemispheres 96.4
2368 Female, age 91, both hemispheres 95.9
Nucleus ambiguus
nTPM: 104.1
2096 Female, age 85, both hemispheres 106.9
2071 Male, age 76, both hemispheres 101.3
Nucleus cuneatus
nTPM: 101.9
2380 Male, age 80, both hemispheres 103.7
2564 Male, age 74, both hemispheres 102.7
2805 Female, age 91, both hemispheres 102.6
2808 Female, age 85, both hemispheres 102.6
2562 Male, age 61, both hemispheres 100.3
2100 Male, age 76, both hemispheres 99.6
Nucleus gracilis
nTPM: 102.8
2627 Male, age 74, both hemispheres 103.4
2382 Male, age 80, both hemispheres 103.2
2299 Female, age 85, both hemispheres 101.9
Nucleus raphe magnus
nTPM: 97.9
2328 Male, age 80, both hemispheres 99.3
2160 Male, age 61, both hemispheres 99.1
2459 Female, age 91, both hemispheres 98.1
2172 Female, age 85, both hemispheres 97.4
2455 Male, age 74, both hemispheres 96.9
2051 Male, age 76, both hemispheres 96.8
Nucleus raphe obscurus
nTPM: 105.1
2142 Male, age 76, midline 109.3
2800 Male, age 61, midline 103.4
2845 Female, age 85, midline 102.6
Nucleus raphe pallidus
nTPM: 104.5
2145 Male, age 76, midline 105.2
2183 Male, age 80, midline 104.8
1924 Male, age 61, midline 103.7
Nucleus tractus solitarii
nTPM: 104.0
2656 Male, age 76, both hemispheres 108.4
2307 Male, age 80, both hemispheres 107.6
2191 Female, age 85, both hemispheres 103.8
2144 Female, age 91, right hemisphere 96.4
Paramedian reticular nucleus
nTPM: 100.0
2050 Female, age 85, both hemispheres 102.1
2057 Male, age 80, both hemispheres 101.4
2313 Male, age 61, both hemispheres 98.5
2052 Male, age 76, both hemispheres 97.9
Parvicellular reticular nuclei
nTPM: 100.9
2119 Male, age 80, both hemispheres 105.8
2095 Male, age 76, both hemispheres 100.6
2558 Male, age 74, both hemispheres 96.4
Parvicellular reticular nuclei, medullary
nTPM: 100.8
2181 Male, age 80, left hemisphere 101.8
2189 Female, age 91, both hemispheres 100.4
2091 Female, age 85, both hemispheres 100.2
Peritrigeminal nucleus
nTPM: 100.0
2067 Female, age 85, both hemispheres 102.1
2136 Male, age 76, both hemispheres 100.0
2179 Male, age 61, both hemispheres 97.9
Pontine nuclei
nTPM: 98.3
2115 Male, age 80, left hemisphere 102.5
2319 Female, age 91, both hemispheres 102.0
2787 Female, age 85, both hemispheres 99.2
1863 Male, age 55, unknown 97.3
2454 Male, age 74, left hemisphere 96.9
1968 Male, age 76, left hemisphere 96.6
2727 Male, age 61, right hemisphere 96.6
2109 Female, age 72, unknown 94.9
Pontine raphe nucleus
nTPM: 105.5
2853 Male, age 76, midline 109.4
2122 Female, age 85, midline 101.5
Posteroventral cochlear nucleus
nTPM: 101.3
2135 Female, age 91, both hemispheres 107.9
2341 Male, age 80, both hemispheres 104.2
2070 Male, age 76, both hemispheres 100.6
2752 Female, age 85, both hemispheres 97.7
2371 Male, age 61, both hemispheres 96.2
Prepositus hypoglossal nucleus
nTPM: 101.7
2086 Male, age 80, both hemispheres 102.5
2855 Female, age 85, right hemisphere 100.9
Principal sensory trigeminal nucleus
nTPM: 100.2
2367 Female, age 91, left hemisphere 102.5
2008 Male, age 80, left hemisphere 99.9
2158 Male, age 61, both hemispheres 99.8
2324 Male, age 76, both hemispheres 98.7
Reticular pontine nucleus, caudal
nTPM: 99.6
2092 Male, age 76, both hemispheres 100.3
2332 Male, age 80, right hemisphere 99.6
2559 Male, age 74, both hemispheres 99.6
2457 Female, age 91, both hemispheres 99.0
Reticular pontine nucleus, oral
nTPM: 102.2
1939 Male, age 80, both hemispheres 104.6
2167 Male, age 76, both hemispheres 103.1
2012 Female, age 85, both hemispheres 102.5
2366 Female, age 91, both hemispheres 101.2
2361 Male, age 74, both hemispheres 99.5
Reticulotegmental nucleus
nTPM: 100.0
2325 Male, age 76, both hemispheres 101.4
2333 Male, age 80, both hemispheres 100.1
2322 Female, age 91, both hemispheres 99.4
2452 Male, age 74, both hemispheres 99.2
Spinal trigeminal nucleus, caudal
nTPM: 99.5
2642 Male, age 74, both hemispheres 104.2
2308 Male, age 80, both hemispheres 101.3
2312 Male, age 61, both hemispheres 98.5
2447 Male, age 76, both hemispheres 98.4
2390 Female, age 91, both hemispheres 95.1
Spinal trigeminal nucleus, interpolar
nTPM: 97.4
2386 Female, age 85, both hemispheres 99.4
2033 Male, age 80, both hemispheres 99.1
2389 Female, age 91, both hemispheres 98.0
2066 Male, age 76, right hemisphere 97.3
2625 Male, age 61, both hemispheres 93.2
Spinal trigeminal nucleus, oral
nTPM: 99.2
1978 Male, age 76, both hemispheres 99.9
2737 Female, age 85, both hemispheres 99.0
2164 Male, age 80, both hemispheres 98.6
Spinal vestibular nucleus
nTPM: 99.5
2780 Male, age 80, both hemispheres 100.9
2748 Male, age 76, both hemispheres 100.4
2384 Male, age 74, both hemispheres 99.8
2806 Female, age 85, both hemispheres 99.7
2796 Male, age 61, both hemispheres 98.2
2186 Female, age 91, both hemispheres 98.1
Subcoeruleus area
nTPM: 101.5
2369 Female, age 85, left hemisphere 107.2
2323 Female, age 91, left hemisphere 101.3
2089 Male, age 76, left hemisphere 101.0
1958 Male, age 80, both hemispheres 100.1
2451 Male, age 74, both hemispheres 97.8
Superior olive
nTPM: 98.9
2329 Male, age 80, right hemisphere 100.9
1875 Female, age 85, both hemispheres 99.9
2364 Male, age 74, right hemisphere 99.1
2561 Female, age 91, both hemispheres 97.4
2020 Male, age 76, both hemispheres 97.2
Superior vestibular nucleus
nTPM: 104.1
2061 Male, age 76, both hemispheres 107.2
2383 Male, age 74, both hemispheres 104.0
2015 Male, age 80, both hemispheres 101.2
Ventral medullary reticular nucleus
nTPM: 100.4
2060 Male, age 76, both hemispheres 105.7
2372 Male, age 61, both hemispheres 95.1
Ventral periolivary nuclei
nTPM: 99.1
2794 Female, age 91, left hemisphere 99.9
2130 Female, age 85, both hemispheres 99.2
2165 Male, age 80, both hemispheres 99.1
2023 Male, age 76, both hemispheres 98.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 99.5
1986 Male, age 76, both hemispheres 101.0
2118 Male, age 80, both hemispheres 100.8
2741 Female, age 85, both hemispheres 98.7
2302 Female, age 91, both hemispheres 98.6
2180 Male, age 61, both hemispheres 98.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 99.3
2840 Female, age 85, both hemispheres 101.3
1959 Male, age 76, both hemispheres 99.5
2456 Female, age 91, both hemispheres 99.4
2359 Male, age 61, both hemispheres 99.1
2161 Male, age 80, both hemispheres 98.8
2449 Male, age 74, both hemispheres 97.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 52.4
FF:10165-103B3 76 years, female 58.6
FF:10182-103D2 60 years, female 46.2
Medulla oblongata
Scaled Tags Per Million: 58.2
FF:10038-101F2 18-64 years, mixed 65.2
FF:10174-103C3 60 years, female 55.7
FF:10155-103A2 76 years, female 53.8
Pons
Scaled Tags Per Million: 48.1
FF:10033-101E6 18-54 years, mixed 48.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 9.2
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.3
Sample A Female 8.5
Sample B Female 8.3
Sample C Male 8.5
Sample D Male 11.6
Pons
nTPM: 8.0
Samples: 4

Max nTPM: 10.8
Min nTPM: 6.6
Sample A Female 7.0
Sample B Female 10.8
Sample C Male 6.6
Sample D Male 7.6

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 81.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 81.4
Samples: 4

Max nTPM: 92.3
Min nTPM: 68.7
Sample A Male 92.3
Sample B Male 82.4
Sample C Female 82.1
Sample D Female 68.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.1
77465028 Antisense, RP_070129_03_A03, Mouse strain C57BL/6J (56 days, male) 6.1
Pons
Expression energy: 7.6
77465028 Antisense, RP_070129_03_A03, Mouse strain C57BL/6J (56 days, male) 7.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.