HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:2.1 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:7.9 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1898 Male, age 80, left hemisphere 13.5
1911 Female, age 85, right hemisphere 11.9
2621 Female, age 67, right hemisphere 11.9
2148 Female, age 91, left hemisphere 11.7
2529 Female, age 94, left hemisphere 11.1
1855 Male, age 76, left hemisphere 10.7
Dentate gyrus
nTPM: 12.2
1927 Female, age 91, both hemispheres 13.4
2010 Male, age 76, both hemispheres 12.5
2531 Female, age 67, both hemispheres 12.5
2528 Male, age 74, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.6
2530 Female, age 94, left hemisphere 11.0
Entorhinal gyrus
nTPM: 13.8
2613 Female, age 94, left hemisphere 16.6
1787 Male, age 76, left hemisphere 15.2
2764 Male, age 80, right hemisphere 15.0
1938 Female, age 85, left hemisphere 14.7
2117 Female, age 91, right hemisphere 10.8
2686 Male, age 75, right hemisphere 10.7
Hippocampus, CA1
nTPM: 13.1
2749 Male, age 80, left hemisphere 17.9
1873 Female, age 85, both hemispheres 12.7
2082 Female, age 91, right hemisphere 12.1
2527 Male, age 74, both hemispheres 11.6
2045 Male, age 76, both hemispheres 11.3
Hippocampus, CA2
nTPM: 12.5
1963 Male, age 80, left hemisphere 13.5
1892 Male, age 76, both hemispheres 13.2
1940 Female, age 85, left hemisphere 12.8
2249 Male, age 74, both hemispheres 12.4
2437 Female, age 94, left hemisphere 12.4
2113 Female, age 91, right hemisphere 10.9
Hippocampus, CA3
nTPM: 13.0
2137 Male, age 80, left hemisphere 16.1
2620 Female, age 94, left hemisphere 13.1
1891 Female, age 85, both hemispheres 12.5
2861 Female, age 67, both hemispheres 12.5
1867 Male, age 76, both hemispheres 12.4
2436 Male, age 74, both hemispheres 11.7
Parahippocampal cortex
nTPM: 13.4
1850 Male, age 80, both hemispheres 16.1
1990 Female, age 91, right hemisphere 15.0
2250 Female, age 67, right hemisphere 14.2
1933 Female, age 85, both hemispheres 14.0
2532 Female, age 72, left hemisphere 13.3
2018 Male, age 76, both hemispheres 12.5
2245 Female, age 91, both hemispheres 12.5
2692 Male, age 74, both hemispheres 12.5
2693 Female, age 94, both hemispheres 12.4
2622 Female, age 67, right hemisphere 11.1
Perirhinal gyrus
nTPM: 15.3
1847 Female, age 91, left hemisphere 17.5
1841 Female, age 85, right hemisphere 15.7
1794 Male, age 80, right hemisphere 15.5
2521 Female, age 94, right hemisphere 14.5
2848 Male, age 76, right hemisphere 13.4
Subiculum
nTPM: 12.1
1977 Female, age 85, both hemispheres 14.5
1901 Male, age 80, both hemispheres 13.1
2619 Male, age 74, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.3
2438 Female, age 94, left hemisphere 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.1
Samples: 197

Max nTPM: 21.0
Min nTPM: 0.0
Std nTPM: 4.2
Median nTPM: 0.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 21.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 17.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 14.7
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 13.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 13.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 13.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 12.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 12.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 12.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 11.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 11.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 22.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.1
Sample A Female 9.5
Sample B Female 9.1
Sample C Male 6.9
Sample D Male 6.1
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 8.5
Min nTPM: 7.3
Sample A Female 8.0
Sample B Female 8.5
Sample C Male 7.9
Sample D Male 7.3
Subiculum
nTPM: 7.8
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.8
Sample A Female 9.5
Sample B Female 7.8
Sample C Male 7.0
Sample D Male 6.8
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.7
Sample A Female 7.7
Sample B Female 6.7
Sample C Male 7.8
Sample D Male 9.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.