HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.5 nTPM
HPA:53.5 nTPM
GTEx:52.6 nTPM
FANTOM5:70.7 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:62.6 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007199
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.5
Sample id Sample description nTPM
Hippocampus
nTPM: 46.0
1898 Male, age 80, left hemisphere 52.8
2148 Female, age 91, left hemisphere 46.0
2621 Female, age 67, right hemisphere 45.9
1855 Male, age 76, left hemisphere 45.8
1911 Female, age 85, right hemisphere 44.2
2529 Female, age 94, left hemisphere 41.6
Dentate gyrus
nTPM: 51.7
2530 Female, age 94, left hemisphere 57.1
2531 Female, age 67, both hemispheres 55.0
1927 Female, age 91, both hemispheres 53.2
2528 Male, age 74, both hemispheres 52.7
2010 Male, age 76, both hemispheres 49.0
2246 Female, age 85, both hemispheres 43.4
Entorhinal gyrus
nTPM: 48.6
2764 Male, age 80, right hemisphere 54.1
2613 Female, age 94, left hemisphere 53.7
1787 Male, age 76, left hemisphere 50.4
1938 Female, age 85, left hemisphere 49.5
2117 Female, age 91, right hemisphere 42.4
2686 Male, age 75, right hemisphere 41.6
Hippocampus, CA1
nTPM: 52.8
2749 Male, age 80, left hemisphere 65.8
2045 Male, age 76, both hemispheres 54.0
1873 Female, age 85, both hemispheres 50.4
2082 Female, age 91, right hemisphere 48.9
2527 Male, age 74, both hemispheres 45.0
Hippocampus, CA2
nTPM: 50.2
1963 Male, age 80, left hemisphere 56.2
1892 Male, age 76, both hemispheres 53.1
2249 Male, age 74, both hemispheres 50.9
2437 Female, age 94, left hemisphere 49.0
1940 Female, age 85, left hemisphere 48.2
2113 Female, age 91, right hemisphere 43.6
Hippocampus, CA3
nTPM: 53.5
2436 Male, age 74, both hemispheres 65.2
2137 Male, age 80, left hemisphere 54.8
2620 Female, age 94, left hemisphere 54.1
2861 Female, age 67, both hemispheres 51.7
1867 Male, age 76, both hemispheres 51.6
1891 Female, age 85, both hemispheres 43.4
Parahippocampal cortex
nTPM: 45.2
1990 Female, age 91, right hemisphere 49.6
1933 Female, age 85, both hemispheres 48.5
2250 Female, age 67, right hemisphere 48.0
1850 Male, age 80, both hemispheres 46.2
2622 Female, age 67, right hemisphere 46.2
2245 Female, age 91, both hemispheres 45.1
2693 Female, age 94, both hemispheres 43.7
2018 Male, age 76, both hemispheres 43.5
2532 Female, age 72, left hemisphere 41.4
2692 Male, age 74, both hemispheres 40.1
Perirhinal gyrus
nTPM: 52.8
1847 Female, age 91, left hemisphere 59.6
1794 Male, age 80, right hemisphere 57.5
2521 Female, age 94, right hemisphere 53.3
1841 Female, age 85, right hemisphere 48.7
2848 Male, age 76, right hemisphere 45.1
Subiculum
nTPM: 44.9
1977 Female, age 85, both hemispheres 50.9
1901 Male, age 80, both hemispheres 45.3
2729 Female, age 91, right hemisphere 44.3
2438 Female, age 94, left hemisphere 44.1
2619 Male, age 74, both hemispheres 43.2
2042 Male, age 76, both hemispheres 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.6
Samples: 197

Max nTPM: 110.0
Min nTPM: 11.0
Std nTPM: 18.6
Median nTPM: 52.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 110.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 103.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 98.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 98.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 89.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 87.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 86.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 85.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 85.0
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 84.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.7
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 67.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 14.3
Sample A Female 25.3
Sample B Female 19.0
Sample C Male 14.3
Sample D Male 15.2
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.9
Sample A Female 18.7
Sample B Female 19.5
Sample C Male 18.8
Sample D Male 14.9
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 21.5
Min nTPM: 13.4
Sample A Female 21.5
Sample B Female 16.6
Sample C Male 17.4
Sample D Male 13.4
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 13.8
Sample A Female 20.9
Sample B Female 13.8
Sample C Male 22.0
Sample D Male 22.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.2
Samples: 4

Max nTPM: 67.3
Min nTPM: 58.2
Sample A Male 62.0
Sample B Male 67.3
Sample C Female 61.3
Sample D Female 58.2
Hippocampal formation
nTPM: 62.6
Samples: 4

Max nTPM: 66.0
Min nTPM: 59.6
Sample A Male 64.5
Sample B Male 60.4
Sample C Female 59.6
Sample D Female 66.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
69443130 Antisense, RP_050414_03_E03, Mouse strain C57BL/6J (56 days, male) 6.4

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