HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.5 nTPM
HPA:21.5 nTPM
GTEx:27.9 nTPM
FANTOM5:59.7 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:51.8 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027405Antibody HPA027459Antibody HPA027463
Glial cells Not detectedNot detectedNot detected
Neuronal cells HighMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.5
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
2148 Female, age 91, left hemisphere 22.6
2621 Female, age 67, right hemisphere 21.8
1855 Male, age 76, left hemisphere 21.0
1898 Male, age 80, left hemisphere 17.9
2529 Female, age 94, left hemisphere 17.8
1911 Female, age 85, right hemisphere 15.7
Dentate gyrus
nTPM: 21.2
2531 Female, age 67, both hemispheres 28.8
2530 Female, age 94, left hemisphere 22.4
2528 Male, age 74, both hemispheres 20.2
2246 Female, age 85, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.7
1927 Female, age 91, both hemispheres 18.3
Entorhinal gyrus
nTPM: 20.9
2613 Female, age 94, left hemisphere 26.2
2764 Male, age 80, right hemisphere 24.2
1787 Male, age 76, left hemisphere 21.3
1938 Female, age 85, left hemisphere 18.4
2117 Female, age 91, right hemisphere 17.7
2686 Male, age 75, right hemisphere 17.7
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 22.0
2045 Male, age 76, both hemispheres 20.4
2082 Female, age 91, right hemisphere 20.4
2527 Male, age 74, both hemispheres 19.3
1873 Female, age 85, both hemispheres 18.5
Hippocampus, CA2
nTPM: 18.8
2437 Female, age 94, left hemisphere 23.3
1963 Male, age 80, left hemisphere 21.2
2113 Female, age 91, right hemisphere 18.9
1892 Male, age 76, both hemispheres 17.6
1940 Female, age 85, left hemisphere 17.4
2249 Male, age 74, both hemispheres 14.6
Hippocampus, CA3
nTPM: 21.5
2861 Female, age 67, both hemispheres 29.3
2620 Female, age 94, left hemisphere 27.9
2137 Male, age 80, left hemisphere 20.2
2436 Male, age 74, both hemispheres 19.3
1867 Male, age 76, both hemispheres 16.9
1891 Female, age 85, both hemispheres 15.3
Parahippocampal cortex
nTPM: 20.1
2622 Female, age 67, right hemisphere 25.9
2532 Female, age 72, left hemisphere 24.0
2245 Female, age 91, both hemispheres 21.6
2018 Male, age 76, both hemispheres 20.0
1850 Male, age 80, both hemispheres 19.0
2693 Female, age 94, both hemispheres 18.6
2250 Female, age 67, right hemisphere 18.4
1990 Female, age 91, right hemisphere 18.0
1933 Female, age 85, both hemispheres 17.9
2692 Male, age 74, both hemispheres 17.8
Perirhinal gyrus
nTPM: 20.0
1794 Male, age 80, right hemisphere 23.2
2521 Female, age 94, right hemisphere 22.2
1847 Female, age 91, left hemisphere 19.5
2848 Male, age 76, right hemisphere 17.6
1841 Female, age 85, right hemisphere 17.4
Subiculum
nTPM: 17.7
2438 Female, age 94, left hemisphere 19.2
2619 Male, age 74, both hemispheres 18.9
1977 Female, age 85, both hemispheres 18.3
2729 Female, age 91, right hemisphere 18.1
2042 Male, age 76, both hemispheres 16.0
1901 Male, age 80, both hemispheres 15.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 54.5
Min nTPM: 12.4
Std nTPM: 6.2
Median nTPM: 27.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 54.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 46.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 44.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 43.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 38.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 38.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 38.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 37.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 37.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 37.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 36.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.7
FF:10169-103B7 60 years, female 62.7
FF:10153-102I9 76 years, female 56.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.3
Sample A Female 13.5
Sample B Female 11.5
Sample C Male 10.2
Sample D Male 8.3
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.5
Sample A Female 12.4
Sample B Female 11.2
Sample C Male 13.3
Sample D Male 10.5
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 14.9
Min nTPM: 9.7
Sample A Female 14.9
Sample B Female 9.7
Sample C Male 11.5
Sample D Male 10.2
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 15.7
Min nTPM: 8.5
Sample A Female 11.5
Sample B Female 8.5
Sample C Male 15.7
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.7
Samples: 4

Max nTPM: 50.9
Min nTPM: 40.9
Sample A Male 47.6
Sample B Male 47.4
Sample C Female 40.9
Sample D Female 50.9
Hippocampal formation
nTPM: 51.8
Samples: 4

Max nTPM: 56.0
Min nTPM: 47.9
Sample A Male 48.5
Sample B Male 54.8
Sample C Female 56.0
Sample D Female 47.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
67815935 Antisense, RP_040920_02_A10, Mouse strain C57BL/6J (56 days, male) 16.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.