HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:12.9 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:45.6 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052592
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.3
1898 Male, age 80, left hemisphere 12.8
2148 Female, age 91, left hemisphere 12.3
1911 Female, age 85, right hemisphere 11.6
2621 Female, age 67, right hemisphere 10.5
1855 Male, age 76, left hemisphere 9.5
2529 Female, age 94, left hemisphere 5.3
Dentate gyrus
nTPM: 11.4
1927 Female, age 91, both hemispheres 21.8
2531 Female, age 67, both hemispheres 12.5
2246 Female, age 85, both hemispheres 10.6
2010 Male, age 76, both hemispheres 9.2
2528 Male, age 74, both hemispheres 8.1
2530 Female, age 94, left hemisphere 6.0
Entorhinal gyrus
nTPM: 8.2
1938 Female, age 85, left hemisphere 11.8
1787 Male, age 76, left hemisphere 10.5
2613 Female, age 94, left hemisphere 8.2
2764 Male, age 80, right hemisphere 8.0
2686 Male, age 75, right hemisphere 6.3
2117 Female, age 91, right hemisphere 4.3
Hippocampus, CA1
nTPM: 14.0
2749 Male, age 80, left hemisphere 23.2
1873 Female, age 85, both hemispheres 16.1
2045 Male, age 76, both hemispheres 15.7
2527 Male, age 74, both hemispheres 8.3
2082 Female, age 91, right hemisphere 6.6
Hippocampus, CA2
nTPM: 9.7
1892 Male, age 76, both hemispheres 14.2
1963 Male, age 80, left hemisphere 11.1
1940 Female, age 85, left hemisphere 10.1
2249 Male, age 74, both hemispheres 8.3
2113 Female, age 91, right hemisphere 7.4
2437 Female, age 94, left hemisphere 7.2
Hippocampus, CA3
nTPM: 14.4
2137 Male, age 80, left hemisphere 27.9
2620 Female, age 94, left hemisphere 15.2
1891 Female, age 85, both hemispheres 11.6
1867 Male, age 76, both hemispheres 11.3
2436 Male, age 74, both hemispheres 10.2
2861 Female, age 67, both hemispheres 10.1
Parahippocampal cortex
nTPM: 8.5
1850 Male, age 80, both hemispheres 11.6
2693 Female, age 94, both hemispheres 9.9
2245 Female, age 91, both hemispheres 9.7
1933 Female, age 85, both hemispheres 9.3
2250 Female, age 67, right hemisphere 9.3
1990 Female, age 91, right hemisphere 9.2
2018 Male, age 76, both hemispheres 8.1
2532 Female, age 72, left hemisphere 7.3
2692 Male, age 74, both hemispheres 5.6
2622 Female, age 67, right hemisphere 5.0
Perirhinal gyrus
nTPM: 13.0
1847 Female, age 91, left hemisphere 15.0
1841 Female, age 85, right hemisphere 14.8
1794 Male, age 80, right hemisphere 13.3
2521 Female, age 94, right hemisphere 12.7
2848 Male, age 76, right hemisphere 9.2
Subiculum
nTPM: 8.0
1901 Male, age 80, both hemispheres 12.8
1977 Female, age 85, both hemispheres 9.6
2729 Female, age 91, right hemisphere 8.1
2042 Male, age 76, both hemispheres 7.5
2619 Male, age 74, both hemispheres 5.5
2438 Female, age 94, left hemisphere 4.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 37.9
Min nTPM: 3.7
Std nTPM: 6.8
Median nTPM: 11.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 34.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 34.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 32.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 29.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 28.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 28.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 27.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.5
FF:10169-103B7 60 years, female 130.7
FF:10153-102I9 76 years, female 48.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 16.2
Sample A Female 25.4
Sample B Female 22.3
Sample C Male 16.2
Sample D Male 18.3
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.2
Sample A Female 16.9
Sample B Female 17.6
Sample C Male 14.9
Sample D Male 12.2
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.8
Sample A Female 15.6
Sample B Female 10.8
Sample C Male 13.0
Sample D Male 11.5
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 21.0
Min nTPM: 10.7
Sample A Female 15.5
Sample B Female 10.7
Sample C Male 12.9
Sample D Male 21.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.6
Samples: 4

Max nTPM: 39.3
Min nTPM: 36.2
Sample A Male 37.1
Sample B Male 37.9
Sample C Female 36.2
Sample D Female 39.3
Hippocampal formation
nTPM: 45.6
Samples: 4

Max nTPM: 48.5
Min nTPM: 40.3
Sample A Male 46.4
Sample B Male 47.1
Sample C Female 48.5
Sample D Female 40.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
69672342 Antisense, RP_050428_03_E12, Mouse strain C57BL/6J (56 days, male) 7.7
74882585 Antisense, RP_060315_04_F04, Mouse strain C57BL/6J (56 days, male) 4.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.