HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:62.0 nTPM
HPA:62.0 nTPM
GTEx:77.3 nTPM
FANTOM5:99.1 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:15.6 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.0
Sample id Sample description nTPM
Hippocampus
nTPM: 62.0
2529 Female, age 94, left hemisphere 64.0
1898 Male, age 80, left hemisphere 63.2
1911 Female, age 85, right hemisphere 62.0
2148 Female, age 91, left hemisphere 62.0
2621 Female, age 67, right hemisphere 60.5
1855 Male, age 76, left hemisphere 60.3
Dentate gyrus
nTPM: 61.2
2530 Female, age 94, left hemisphere 69.0
2010 Male, age 76, both hemispheres 62.8
2246 Female, age 85, both hemispheres 59.6
2531 Female, age 67, both hemispheres 58.7
1927 Female, age 91, both hemispheres 58.5
2528 Male, age 74, both hemispheres 58.4
Entorhinal gyrus
nTPM: 58.8
2117 Female, age 91, right hemisphere 65.3
2686 Male, age 75, right hemisphere 64.9
1938 Female, age 85, left hemisphere 58.1
2764 Male, age 80, right hemisphere 57.3
2613 Female, age 94, left hemisphere 54.3
1787 Male, age 76, left hemisphere 53.2
Hippocampus, CA1
nTPM: 60.4
2749 Male, age 80, left hemisphere 64.2
2082 Female, age 91, right hemisphere 61.0
1873 Female, age 85, both hemispheres 60.4
2527 Male, age 74, both hemispheres 59.0
2045 Male, age 76, both hemispheres 57.5
Hippocampus, CA2
nTPM: 61.6
1963 Male, age 80, left hemisphere 67.1
1940 Female, age 85, left hemisphere 63.2
2113 Female, age 91, right hemisphere 60.2
2249 Male, age 74, both hemispheres 59.8
2437 Female, age 94, left hemisphere 59.8
1892 Male, age 76, both hemispheres 59.7
Hippocampus, CA3
nTPM: 59.5
1891 Female, age 85, both hemispheres 64.6
2137 Male, age 80, left hemisphere 64.6
1867 Male, age 76, both hemispheres 60.8
2861 Female, age 67, both hemispheres 57.1
2436 Male, age 74, both hemispheres 56.0
2620 Female, age 94, left hemisphere 54.0
Parahippocampal cortex
nTPM: 56.9
2692 Male, age 74, both hemispheres 62.3
1850 Male, age 80, both hemispheres 61.5
1990 Female, age 91, right hemisphere 58.3
2245 Female, age 91, both hemispheres 58.0
2532 Female, age 72, left hemisphere 57.5
2018 Male, age 76, both hemispheres 56.6
2622 Female, age 67, right hemisphere 54.5
1933 Female, age 85, both hemispheres 54.3
2693 Female, age 94, both hemispheres 53.7
2250 Female, age 67, right hemisphere 52.7
Perirhinal gyrus
nTPM: 54.9
1794 Male, age 80, right hemisphere 56.3
1847 Female, age 91, left hemisphere 56.1
1841 Female, age 85, right hemisphere 56.0
2848 Male, age 76, right hemisphere 53.8
2521 Female, age 94, right hemisphere 52.4
Subiculum
nTPM: 61.9
1901 Male, age 80, both hemispheres 66.0
2438 Female, age 94, left hemisphere 64.6
2042 Male, age 76, both hemispheres 62.9
2729 Female, age 91, right hemisphere 62.7
1977 Female, age 85, both hemispheres 58.5
2619 Male, age 74, both hemispheres 56.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.3
Samples: 197

Max nTPM: 196.5
Min nTPM: 19.0
Std nTPM: 29.3
Median nTPM: 70.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 196.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 190.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 178.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 161.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 158.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 154.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 151.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 137.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 137.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 136.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 134.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.1
FF:10153-102I9 76 years, female 101.0
FF:10169-103B7 60 years, female 97.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.6
Samples: 4

Max nTPM: 74.7
Min nTPM: 56.6
Sample A Female 74.7
Sample B Female 57.8
Sample C Male 73.1
Sample D Male 56.6
Entorhinal cortex
nTPM: 49.6
Samples: 4

Max nTPM: 53.2
Min nTPM: 47.9
Sample A Female 49.3
Sample B Female 53.2
Sample C Male 47.9
Sample D Male 48.0
Subiculum
nTPM: 53.0
Samples: 4

Max nTPM: 62.7
Min nTPM: 47.9
Sample A Female 62.7
Sample B Female 50.9
Sample C Male 47.9
Sample D Male 50.4
Ventral hippocampus
nTPM: 57.3
Samples: 4

Max nTPM: 66.3
Min nTPM: 48.1
Sample A Female 55.6
Sample B Female 48.1
Sample C Male 59.0
Sample D Male 66.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 15.1
Sample A Male 16.3
Sample B Male 15.6
Sample C Female 15.3
Sample D Female 15.1
Hippocampal formation
nTPM: 14.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 19.8
Sample C Female 13.5
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
70231098 Antisense, RP_050526_01_C01, Mouse strain C57BL/6J (56 days, male) 6.7

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