HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.1 nTPM
HPA:16.1 nTPM
GTEx:11.1 nTPM
FANTOM5:35.9 Scaled Tags Per Million
Pig:41.3 nTPM
Mouse:29.4 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006206Antibody CAB009373
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.1
Sample id Sample description nTPM
Hippocampus
nTPM: 5.6
1898 Male, age 80, left hemisphere 12.5
2621 Female, age 67, right hemisphere 6.9
1855 Male, age 76, left hemisphere 5.4
2148 Female, age 91, left hemisphere 4.6
2529 Female, age 94, left hemisphere 3.4
1911 Female, age 85, right hemisphere 0.6
Dentate gyrus
nTPM: 5.0
2531 Female, age 67, both hemispheres 17.7
2246 Female, age 85, both hemispheres 4.9
2530 Female, age 94, left hemisphere 3.6
1927 Female, age 91, both hemispheres 2.6
2010 Male, age 76, both hemispheres 1.1
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 2.6
2764 Male, age 80, right hemisphere 12.6
2686 Male, age 75, right hemisphere 2.3
1787 Male, age 76, left hemisphere 0.8
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 16.1
2749 Male, age 80, left hemisphere 51.8
2045 Male, age 76, both hemispheres 16.3
2082 Female, age 91, right hemisphere 6.5
2527 Male, age 74, both hemispheres 3.9
1873 Female, age 85, both hemispheres 2.1
Hippocampus, CA2
nTPM: 5.2
1892 Male, age 76, both hemispheres 11.0
1940 Female, age 85, left hemisphere 6.6
2113 Female, age 91, right hemisphere 5.2
1963 Male, age 80, left hemisphere 5.1
2437 Female, age 94, left hemisphere 3.2
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 15.8
2137 Male, age 80, left hemisphere 44.1
1867 Male, age 76, both hemispheres 20.3
2861 Female, age 67, both hemispheres 19.7
2620 Female, age 94, left hemisphere 10.8
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 3.9
2245 Female, age 91, both hemispheres 10.9
2532 Female, age 72, left hemisphere 10.2
2622 Female, age 67, right hemisphere 5.7
1850 Male, age 80, both hemispheres 4.8
2250 Female, age 67, right hemisphere 3.2
1933 Female, age 85, both hemispheres 2.5
2693 Female, age 94, both hemispheres 1.8
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 7.7
1794 Male, age 80, right hemisphere 11.0
2848 Male, age 76, right hemisphere 8.8
1841 Female, age 85, right hemisphere 8.7
2521 Female, age 94, right hemisphere 6.5
1847 Female, age 91, left hemisphere 3.3
Subiculum
nTPM: 6.5
1901 Male, age 80, both hemispheres 19.5
2438 Female, age 94, left hemisphere 13.4
2042 Male, age 76, both hemispheres 4.4
2729 Female, age 91, right hemisphere 1.3
1977 Female, age 85, both hemispheres 0.2
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 98.4
Min nTPM: 0.3
Std nTPM: 10.3
Median nTPM: 8.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 98.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 42.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 39.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 31.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 29.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 28.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 27.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 25.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.9
FF:10169-103B7 60 years, female 54.4
FF:10153-102I9 76 years, female 17.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.0
Samples: 4

Max nTPM: 33.6
Min nTPM: 20.1
Sample A Female 32.4
Sample B Female 33.6
Sample C Male 20.1
Sample D Male 29.7
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 58.4
Min nTPM: 27.8
Sample A Female 58.4
Sample B Female 27.8
Sample C Male 29.0
Sample D Male 49.8
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 30.2
Min nTPM: 14.1
Sample A Female 30.2
Sample B Female 14.1
Sample C Male 19.0
Sample D Male 14.3
Ventral hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 43.4
Min nTPM: 15.4
Sample A Female 18.1
Sample B Female 15.4
Sample C Male 19.0
Sample D Male 43.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 46.0
Min nTPM: 21.7
Sample A Male 22.9
Sample B Male 46.0
Sample C Female 21.7
Sample D Female 27.0
Hippocampal formation
nTPM: 22.7
Samples: 4

Max nTPM: 26.8
Min nTPM: 19.2
Sample A Male 19.2
Sample B Male 26.8
Sample C Female 24.9
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
73606485 Antisense, RP_051130_01_A05, Mouse strain C57BL/6J (56 days, male) 7.6
74581377 Antisense, RP_051130_01_A05, Mouse strain C57BL/6J (56 days, male) 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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