HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:59.4 nTPM
HPA:59.4 nTPM
GTEx:68.9 nTPM
FANTOM5:43.9 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:12.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.4
Sample id Sample description nTPM
Hippocampus
nTPM: 46.4
2529 Female, age 94, left hemisphere 55.1
1911 Female, age 85, right hemisphere 52.2
1898 Male, age 80, left hemisphere 46.4
2621 Female, age 67, right hemisphere 44.5
1855 Male, age 76, left hemisphere 40.8
2148 Female, age 91, left hemisphere 39.5
Dentate gyrus
nTPM: 44.8
2530 Female, age 94, left hemisphere 67.3
2528 Male, age 74, both hemispheres 50.5
2010 Male, age 76, both hemispheres 45.3
2246 Female, age 85, both hemispheres 37.5
2531 Female, age 67, both hemispheres 34.7
1927 Female, age 91, both hemispheres 33.2
Entorhinal gyrus
nTPM: 52.0
2117 Female, age 91, right hemisphere 85.4
2764 Male, age 80, right hemisphere 62.4
2613 Female, age 94, left hemisphere 42.6
1787 Male, age 76, left hemisphere 41.9
1938 Female, age 85, left hemisphere 41.4
2686 Male, age 75, right hemisphere 38.3
Hippocampus, CA1
nTPM: 35.0
2527 Male, age 74, both hemispheres 44.4
1873 Female, age 85, both hemispheres 39.8
2082 Female, age 91, right hemisphere 34.9
2749 Male, age 80, left hemisphere 31.1
2045 Male, age 76, both hemispheres 24.9
Hippocampus, CA2
nTPM: 47.3
2249 Male, age 74, both hemispheres 60.4
1963 Male, age 80, left hemisphere 59.5
2437 Female, age 94, left hemisphere 46.9
1940 Female, age 85, left hemisphere 44.8
2113 Female, age 91, right hemisphere 41.8
1892 Male, age 76, both hemispheres 30.3
Hippocampus, CA3
nTPM: 36.9
1891 Female, age 85, both hemispheres 56.2
1867 Male, age 76, both hemispheres 44.4
2436 Male, age 74, both hemispheres 36.2
2861 Female, age 67, both hemispheres 31.6
2137 Male, age 80, left hemisphere 26.8
2620 Female, age 94, left hemisphere 26.3
Parahippocampal cortex
nTPM: 40.2
1990 Female, age 91, right hemisphere 50.4
2692 Male, age 74, both hemispheres 49.8
2532 Female, age 72, left hemisphere 49.0
2018 Male, age 76, both hemispheres 42.3
1933 Female, age 85, both hemispheres 40.3
2245 Female, age 91, both hemispheres 40.1
1850 Male, age 80, both hemispheres 37.7
2622 Female, age 67, right hemisphere 31.3
2250 Female, age 67, right hemisphere 31.0
2693 Female, age 94, both hemispheres 30.4
Perirhinal gyrus
nTPM: 31.5
1794 Male, age 80, right hemisphere 35.7
2521 Female, age 94, right hemisphere 34.3
1841 Female, age 85, right hemisphere 29.9
1847 Female, age 91, left hemisphere 29.5
2848 Male, age 76, right hemisphere 28.1
Subiculum
nTPM: 59.4
2042 Male, age 76, both hemispheres 77.0
1901 Male, age 80, both hemispheres 65.5
1977 Female, age 85, both hemispheres 56.7
2619 Male, age 74, both hemispheres 55.2
2438 Female, age 94, left hemisphere 54.3
2729 Female, age 91, right hemisphere 47.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.9
Samples: 197

Max nTPM: 269.4
Min nTPM: 13.3
Std nTPM: 38.4
Median nTPM: 62.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 269.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 227.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 179.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 171.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 166.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 166.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 161.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 159.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 155.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 151.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 150.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.9
FF:10153-102I9 76 years, female 53.3
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 33.8
Min nTPM: 10.6
Sample A Female 33.8
Sample B Female 16.7
Sample C Male 26.7
Sample D Male 10.6
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 15.4
Sample A Female 15.7
Sample B Female 16.2
Sample C Male 17.5
Sample D Male 15.4
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.1
Sample A Female 20.0
Sample B Female 13.8
Sample C Male 12.1
Sample D Male 12.1
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.9
Min nTPM: 10.3
Sample A Female 19.9
Sample B Female 10.3
Sample C Male 18.1
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.3
Sample A Male 13.4
Sample B Male 13.3
Sample C Female 10.3
Sample D Female 10.7
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 10.8
Min nTPM: 8.7
Sample A Male 10.2
Sample B Male 9.7
Sample C Female 8.7
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
67792190 Antisense, RP_040920_01_C08, Mouse strain C57BL/6J (56 days, male) 0.3
72007936 Antisense, RP_051017_01_B05, Mouse strain C57BL/6J (56 days, male) 0.2

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