COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.8 nTPM
HPA:10.1 nTPM
GTEx:16.8 nTPM
FANTOM5:38.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB028366
Endothelial cells Low
Glandular cells Low
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 10.1
overview
Male, age 54 		Colon sample 67
nTPM: 8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 15.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 10.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 13.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 16.8
Samples: 373

Max nTPM: 74.6
Min nTPM: 5.1
Std nTPM: 8.2
Median nTPM: 14.9
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 74.6
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 52.0
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 51.0
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 47.9
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 46.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 43.8
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 41.3
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 41.1
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 40.2
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 38.1
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 37.2
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Colon - Transverse
Average nTPM: 15.6
Samples: 406

Max nTPM: 87.2
Min nTPM: 4.1
Std nTPM: 10.9
Median nTPM: 11.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 87.2
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 63.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 56.1
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 52.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 52.7
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 52.0
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 49.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 48.5
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 48.0
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 46.8
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 45.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 38.1
FF:10014-101C5 62,83,84 years, mixed 38.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.