HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:6.0 nTPM
HPA:6.0 nTPM
GTEx:20.3 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:42.5 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047369Antibody HPA051484
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.0
Sample id Sample description nTPM
Hippocampus
nTPM: 3.7
2148 Female, age 91, left hemisphere 6.5
1911 Female, age 85, right hemisphere 4.6
2621 Female, age 67, right hemisphere 4.0
1855 Male, age 76, left hemisphere 3.3
2529 Female, age 94, left hemisphere 2.5
1898 Male, age 80, left hemisphere 1.2
Dentate gyrus
nTPM: 4.4
1927 Female, age 91, both hemispheres 7.1
2531 Female, age 67, both hemispheres 6.3
2246 Female, age 85, both hemispheres 4.5
2530 Female, age 94, left hemisphere 3.7
2010 Male, age 76, both hemispheres 3.3
2528 Male, age 74, both hemispheres 1.8
Entorhinal gyrus
nTPM: 4.8
2686 Male, age 75, right hemisphere 8.3
2613 Female, age 94, left hemisphere 8.2
1938 Female, age 85, left hemisphere 4.3
2764 Male, age 80, right hemisphere 3.7
1787 Male, age 76, left hemisphere 2.4
2117 Female, age 91, right hemisphere 1.5
Hippocampus, CA1
nTPM: 5.4
2082 Female, age 91, right hemisphere 6.9
2045 Male, age 76, both hemispheres 6.8
2749 Male, age 80, left hemisphere 5.3
2527 Male, age 74, both hemispheres 4.0
1873 Female, age 85, both hemispheres 3.8
Hippocampus, CA2
nTPM: 4.1
2113 Female, age 91, right hemisphere 5.8
1892 Male, age 76, both hemispheres 4.5
2437 Female, age 94, left hemisphere 4.3
1940 Female, age 85, left hemisphere 4.0
1963 Male, age 80, left hemisphere 4.0
2249 Male, age 74, both hemispheres 2.0
Hippocampus, CA3
nTPM: 6.0
2137 Male, age 80, left hemisphere 11.4
2861 Female, age 67, both hemispheres 7.8
2620 Female, age 94, left hemisphere 7.4
2436 Male, age 74, both hemispheres 3.2
1867 Male, age 76, both hemispheres 3.1
1891 Female, age 85, both hemispheres 3.0
Parahippocampal cortex
nTPM: 4.9
2693 Female, age 94, both hemispheres 7.8
2622 Female, age 67, right hemisphere 6.2
2692 Male, age 74, both hemispheres 5.5
2532 Female, age 72, left hemisphere 5.0
2018 Male, age 76, both hemispheres 4.8
2245 Female, age 91, both hemispheres 4.8
1990 Female, age 91, right hemisphere 4.2
2250 Female, age 67, right hemisphere 3.8
1850 Male, age 80, both hemispheres 3.5
1933 Female, age 85, both hemispheres 2.9
Perirhinal gyrus
nTPM: 3.2
2848 Male, age 76, right hemisphere 5.0
2521 Female, age 94, right hemisphere 4.1
1847 Female, age 91, left hemisphere 3.3
1841 Female, age 85, right hemisphere 2.1
1794 Male, age 80, right hemisphere 1.3
Subiculum
nTPM: 4.3
1901 Male, age 80, both hemispheres 6.8
2729 Female, age 91, right hemisphere 5.2
2042 Male, age 76, both hemispheres 4.6
2619 Male, age 74, both hemispheres 4.3
1977 Female, age 85, both hemispheres 3.7
2438 Female, age 94, left hemisphere 1.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 45.1
Min nTPM: 12.4
Std nTPM: 3.8
Median nTPM: 19.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 45.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 34.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 32.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 28.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 27.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 26.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 21.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 32.1
Min nTPM: 21.0
Sample A Female 32.1
Sample B Female 26.3
Sample C Male 24.9
Sample D Male 21.0
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 23.9
Min nTPM: 17.4
Sample A Female 23.0
Sample B Female 23.9
Sample C Male 21.4
Sample D Male 17.4
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 28.0
Min nTPM: 19.8
Sample A Female 28.0
Sample B Female 21.8
Sample C Male 21.0
Sample D Male 19.8
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 29.3
Min nTPM: 18.4
Sample A Female 24.4
Sample B Female 18.4
Sample C Male 26.9
Sample D Male 29.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.9
Samples: 4

Max nTPM: 44.5
Min nTPM: 39.9
Sample A Male 44.5
Sample B Male 40.0
Sample C Female 43.0
Sample D Female 39.9
Hippocampal formation
nTPM: 42.5
Samples: 4

Max nTPM: 43.9
Min nTPM: 41.1
Sample A Male 43.0
Sample B Male 41.1
Sample C Female 43.9
Sample D Female 42.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68269038 Antisense, RP_041208_01_F01, Mouse strain C57BL/6J (56 days, male) 5.0
77869146 Antisense, RP_070205_01_A12, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

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