HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:12.1 nTPM
FANTOM5:39.5 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:16.2 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
2621 Female, age 67, right hemisphere 11.8
1855 Male, age 76, left hemisphere 11.7
1911 Female, age 85, right hemisphere 11.6
2148 Female, age 91, left hemisphere 11.2
1898 Male, age 80, left hemisphere 11.1
2529 Female, age 94, left hemisphere 10.2
Dentate gyrus
nTPM: 11.5
2531 Female, age 67, both hemispheres 12.1
2010 Male, age 76, both hemispheres 12.0
2246 Female, age 85, both hemispheres 11.7
1927 Female, age 91, both hemispheres 11.4
2530 Female, age 94, left hemisphere 11.2
2528 Male, age 74, both hemispheres 10.9
Entorhinal gyrus
nTPM: 10.8
2764 Male, age 80, right hemisphere 11.4
1787 Male, age 76, left hemisphere 11.3
2117 Female, age 91, right hemisphere 11.2
1938 Female, age 85, left hemisphere 10.4
2613 Female, age 94, left hemisphere 10.4
2686 Male, age 75, right hemisphere 10.3
Hippocampus, CA1
nTPM: 11.7
2045 Male, age 76, both hemispheres 13.3
2749 Male, age 80, left hemisphere 12.0
2527 Male, age 74, both hemispheres 11.8
1873 Female, age 85, both hemispheres 11.2
2082 Female, age 91, right hemisphere 10.2
Hippocampus, CA2
nTPM: 11.3
1892 Male, age 76, both hemispheres 12.7
1963 Male, age 80, left hemisphere 11.3
1940 Female, age 85, left hemisphere 11.2
2437 Female, age 94, left hemisphere 11.1
2249 Male, age 74, both hemispheres 10.9
2113 Female, age 91, right hemisphere 10.4
Hippocampus, CA3
nTPM: 11.5
2137 Male, age 80, left hemisphere 12.0
2436 Male, age 74, both hemispheres 11.9
1891 Female, age 85, both hemispheres 11.7
2620 Female, age 94, left hemisphere 11.6
1867 Male, age 76, both hemispheres 11.2
2861 Female, age 67, both hemispheres 10.4
Parahippocampal cortex
nTPM: 11.3
2692 Male, age 74, both hemispheres 13.3
1850 Male, age 80, both hemispheres 12.0
2693 Female, age 94, both hemispheres 12.0
2532 Female, age 72, left hemisphere 11.7
1990 Female, age 91, right hemisphere 11.3
2622 Female, age 67, right hemisphere 10.9
2245 Female, age 91, both hemispheres 10.8
1933 Female, age 85, both hemispheres 10.6
2018 Male, age 76, both hemispheres 10.4
2250 Female, age 67, right hemisphere 10.4
Perirhinal gyrus
nTPM: 11.2
2848 Male, age 76, right hemisphere 11.8
2521 Female, age 94, right hemisphere 11.3
1794 Male, age 80, right hemisphere 11.2
1847 Female, age 91, left hemisphere 10.9
1841 Female, age 85, right hemisphere 10.6
Subiculum
nTPM: 11.7
2438 Female, age 94, left hemisphere 12.5
2619 Male, age 74, both hemispheres 12.5
1901 Male, age 80, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.6
1977 Female, age 85, both hemispheres 11.3
2729 Female, age 91, right hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 22.9
Min nTPM: 5.9
Std nTPM: 2.5
Median nTPM: 12.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 19.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 18.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 17.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 17.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 16.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 16.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 16.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 16.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.5
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 31.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.2
Sample A Female 13.9
Sample B Female 12.7
Sample C Male 12.1
Sample D Male 11.2
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 12.7
Sample A Female 14.8
Sample B Female 13.1
Sample C Male 12.7
Sample D Male 12.8
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.0
Sample A Female 13.7
Sample B Female 11.0
Sample C Male 12.2
Sample D Male 11.3
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.3
Sample A Female 11.4
Sample B Female 10.3
Sample C Male 12.9
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.5
Min nTPM: 13.0
Sample A Male 13.4
Sample B Male 13.0
Sample C Female 14.4
Sample D Female 15.5
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.2
Sample A Male 14.6
Sample B Male 17.9
Sample C Female 18.0
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
74578377 Antisense, RP_060215_01_B12, Mouse strain C57BL/6J (56 days, male) 7.2
73927790 Antisense, RP_051219_01_G08, Mouse strain C57BL/6J (56 days, male) 0.0

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