HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:12.5 nTPM
FANTOM5:24.0 Scaled Tags Per Million
Pig:8.0 nTPM
Mouse:18.8 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043226Antibody HPA043534Antibody CAB025530
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
1898 Male, age 80, left hemisphere 11.6
1855 Male, age 76, left hemisphere 9.3
2529 Female, age 94, left hemisphere 9.0
2148 Female, age 91, left hemisphere 8.4
2621 Female, age 67, right hemisphere 8.4
1911 Female, age 85, right hemisphere 8.2
Dentate gyrus
nTPM: 9.6
1927 Female, age 91, both hemispheres 11.2
2528 Male, age 74, both hemispheres 10.5
2010 Male, age 76, both hemispheres 10.0
2246 Female, age 85, both hemispheres 9.3
2530 Female, age 94, left hemisphere 8.6
2531 Female, age 67, both hemispheres 8.0
Entorhinal gyrus
nTPM: 8.9
2764 Male, age 80, right hemisphere 12.1
1787 Male, age 76, left hemisphere 9.8
2613 Female, age 94, left hemisphere 9.2
1938 Female, age 85, left hemisphere 8.8
2117 Female, age 91, right hemisphere 7.9
2686 Male, age 75, right hemisphere 5.7
Hippocampus, CA1
nTPM: 10.9
2749 Male, age 80, left hemisphere 18.3
1873 Female, age 85, both hemispheres 10.6
2527 Male, age 74, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.3
2045 Male, age 76, both hemispheres 7.9
Hippocampus, CA2
nTPM: 10.2
1963 Male, age 80, left hemisphere 14.0
1892 Male, age 76, both hemispheres 12.3
2249 Male, age 74, both hemispheres 10.4
2437 Female, age 94, left hemisphere 8.6
2113 Female, age 91, right hemisphere 8.2
1940 Female, age 85, left hemisphere 7.5
Hippocampus, CA3
nTPM: 9.2
2137 Male, age 80, left hemisphere 11.8
2436 Male, age 74, both hemispheres 10.8
1867 Male, age 76, both hemispheres 8.9
2620 Female, age 94, left hemisphere 8.9
1891 Female, age 85, both hemispheres 8.3
2861 Female, age 67, both hemispheres 6.6
Parahippocampal cortex
nTPM: 8.7
2245 Female, age 91, both hemispheres 9.9
1933 Female, age 85, both hemispheres 9.7
1990 Female, age 91, right hemisphere 9.5
1850 Male, age 80, both hemispheres 9.3
2250 Female, age 67, right hemisphere 9.0
2532 Female, age 72, left hemisphere 8.9
2692 Male, age 74, both hemispheres 8.4
2018 Male, age 76, both hemispheres 8.1
2622 Female, age 67, right hemisphere 7.3
2693 Female, age 94, both hemispheres 6.6
Perirhinal gyrus
nTPM: 9.6
1794 Male, age 80, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.6
2521 Female, age 94, right hemisphere 8.6
1841 Female, age 85, right hemisphere 8.2
2848 Male, age 76, right hemisphere 7.6
Subiculum
nTPM: 8.2
2619 Male, age 74, both hemispheres 10.4
1977 Female, age 85, both hemispheres 10.3
1901 Male, age 80, both hemispheres 8.6
2729 Female, age 91, right hemisphere 7.9
2042 Male, age 76, both hemispheres 6.1
2438 Female, age 94, left hemisphere 5.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 29.7
Min nTPM: 5.1
Std nTPM: 4.7
Median nTPM: 11.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 29.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 24.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 23.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 23.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 21.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 21.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 21.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 20.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.0
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 10.5
Min nTPM: 4.9
Sample A Female 10.5
Sample B Female 7.1
Sample C Male 9.4
Sample D Male 4.9
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.0
Sample A Female 6.2
Sample B Female 7.2
Sample C Male 7.3
Sample D Male 5.0
Subiculum
nTPM: 7.5
Samples: 4

Max nTPM: 11.1
Min nTPM: 5.1
Sample A Female 11.1
Sample B Female 7.5
Sample C Male 6.3
Sample D Male 5.1
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 10.0
Min nTPM: 5.5
Sample A Female 10.0
Sample B Female 5.5
Sample C Male 8.4
Sample D Male 5.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.0
Sample A Male 17.8
Sample B Male 18.4
Sample C Female 17.5
Sample D Female 15.0
Hippocampal formation
nTPM: 18.8
Samples: 4

Max nTPM: 19.4
Min nTPM: 18.2
Sample A Male 18.3
Sample B Male 19.4
Sample C Female 18.2
Sample D Female 19.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
67814215 Antisense, RP_040920_01_G03, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.