HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.3 nTPM
HPA:41.3 nTPM
GTEx:31.2 nTPM
FANTOM5:64.3 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:71.7 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034593Antibody CAB022410
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.7
2148 Female, age 91, left hemisphere 40.5
1855 Male, age 76, left hemisphere 36.8
1911 Female, age 85, right hemisphere 35.4
2621 Female, age 67, right hemisphere 34.3
2529 Female, age 94, left hemisphere 31.4
1898 Male, age 80, left hemisphere 29.6
Dentate gyrus
nTPM: 35.6
2531 Female, age 67, both hemispheres 41.7
1927 Female, age 91, both hemispheres 39.3
2246 Female, age 85, both hemispheres 39.3
2528 Male, age 74, both hemispheres 34.9
2010 Male, age 76, both hemispheres 32.8
2530 Female, age 94, left hemisphere 25.7
Entorhinal gyrus
nTPM: 37.7
2613 Female, age 94, left hemisphere 46.6
1938 Female, age 85, left hemisphere 40.7
2764 Male, age 80, right hemisphere 37.0
2686 Male, age 75, right hemisphere 35.9
1787 Male, age 76, left hemisphere 35.0
2117 Female, age 91, right hemisphere 31.2
Hippocampus, CA1
nTPM: 38.9
2749 Male, age 80, left hemisphere 42.3
2045 Male, age 76, both hemispheres 41.7
2082 Female, age 91, right hemisphere 37.3
1873 Female, age 85, both hemispheres 37.2
2527 Male, age 74, both hemispheres 36.2
Hippocampus, CA2
nTPM: 33.9
1963 Male, age 80, left hemisphere 38.3
2113 Female, age 91, right hemisphere 37.5
1892 Male, age 76, both hemispheres 34.2
2249 Male, age 74, both hemispheres 32.8
1940 Female, age 85, left hemisphere 31.7
2437 Female, age 94, left hemisphere 28.8
Hippocampus, CA3
nTPM: 40.0
2620 Female, age 94, left hemisphere 45.8
2137 Male, age 80, left hemisphere 44.3
2436 Male, age 74, both hemispheres 40.7
2861 Female, age 67, both hemispheres 40.5
1891 Female, age 85, both hemispheres 36.4
1867 Male, age 76, both hemispheres 32.3
Parahippocampal cortex
nTPM: 38.4
2693 Female, age 94, both hemispheres 45.7
1850 Male, age 80, both hemispheres 41.9
2622 Female, age 67, right hemisphere 41.6
1933 Female, age 85, both hemispheres 39.6
2692 Male, age 74, both hemispheres 39.4
2245 Female, age 91, both hemispheres 37.3
1990 Female, age 91, right hemisphere 35.9
2250 Female, age 67, right hemisphere 35.5
2532 Female, age 72, left hemisphere 35.2
2018 Male, age 76, both hemispheres 32.1
Perirhinal gyrus
nTPM: 41.3
2848 Male, age 76, right hemisphere 43.7
1841 Female, age 85, right hemisphere 43.5
1847 Female, age 91, left hemisphere 41.7
2521 Female, age 94, right hemisphere 41.1
1794 Male, age 80, right hemisphere 36.6
Subiculum
nTPM: 33.0
1977 Female, age 85, both hemispheres 37.0
2729 Female, age 91, right hemisphere 36.1
2619 Male, age 74, both hemispheres 35.8
1901 Male, age 80, both hemispheres 31.8
2438 Female, age 94, left hemisphere 31.1
2042 Male, age 76, both hemispheres 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 65.5
Min nTPM: 14.2
Std nTPM: 10.0
Median nTPM: 29.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 65.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 58.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 57.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 55.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 54.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 54.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 52.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 51.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 51.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 50.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.3
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 54.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 35.7
Min nTPM: 25.5
Sample A Female 35.7
Sample B Female 27.6
Sample C Male 28.8
Sample D Male 25.5
Entorhinal cortex
nTPM: 32.0
Samples: 4

Max nTPM: 36.8
Min nTPM: 26.9
Sample A Female 32.6
Sample B Female 36.8
Sample C Male 31.7
Sample D Male 26.9
Subiculum
nTPM: 31.0
Samples: 4

Max nTPM: 38.5
Min nTPM: 26.3
Sample A Female 38.5
Sample B Female 28.9
Sample C Male 26.3
Sample D Male 30.4
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 34.1
Min nTPM: 26.8
Sample A Female 34.1
Sample B Female 26.8
Sample C Male 29.7
Sample D Male 28.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.3
Samples: 4

Max nTPM: 71.3
Min nTPM: 58.9
Sample A Male 58.9
Sample B Male 68.1
Sample C Female 70.7
Sample D Female 71.3
Hippocampal formation
nTPM: 71.7
Samples: 4

Max nTPM: 81.1
Min nTPM: 64.9
Sample A Male 81.1
Sample B Male 64.9
Sample C Female 71.6
Sample D Female 69.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
513474 Antisense, RP_040810_01_G04, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.