HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.2 nTPM
HPA:32.2 nTPM
GTEx:27.7 nTPM
FANTOM5:105.9 Scaled Tags Per Million
Pig:45.8 nTPM
Mouse:58.1 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000528
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.8
1898 Male, age 80, left hemisphere 29.1
2529 Female, age 94, left hemisphere 28.4
2621 Female, age 67, right hemisphere 26.7
1855 Male, age 76, left hemisphere 26.1
2148 Female, age 91, left hemisphere 25.3
1911 Female, age 85, right hemisphere 24.9
Dentate gyrus
nTPM: 26.4
2530 Female, age 94, left hemisphere 29.4
2010 Male, age 76, both hemispheres 28.2
1927 Female, age 91, both hemispheres 26.7
2531 Female, age 67, both hemispheres 26.2
2246 Female, age 85, both hemispheres 25.7
2528 Male, age 74, both hemispheres 22.2
Entorhinal gyrus
nTPM: 28.2
1938 Female, age 85, left hemisphere 31.2
1787 Male, age 76, left hemisphere 30.0
2764 Male, age 80, right hemisphere 29.3
2686 Male, age 75, right hemisphere 27.8
2613 Female, age 94, left hemisphere 26.6
2117 Female, age 91, right hemisphere 24.2
Hippocampus, CA1
nTPM: 27.5
2749 Male, age 80, left hemisphere 32.2
2045 Male, age 76, both hemispheres 28.5
1873 Female, age 85, both hemispheres 26.6
2527 Male, age 74, both hemispheres 26.4
2082 Female, age 91, right hemisphere 23.8
Hippocampus, CA2
nTPM: 27.5
1892 Male, age 76, both hemispheres 34.5
1963 Male, age 80, left hemisphere 28.0
1940 Female, age 85, left hemisphere 27.2
2437 Female, age 94, left hemisphere 26.9
2113 Female, age 91, right hemisphere 25.3
2249 Male, age 74, both hemispheres 23.3
Hippocampus, CA3
nTPM: 27.6
2137 Male, age 80, left hemisphere 32.6
1867 Male, age 76, both hemispheres 31.8
1891 Female, age 85, both hemispheres 26.3
2620 Female, age 94, left hemisphere 25.8
2861 Female, age 67, both hemispheres 25.4
2436 Male, age 74, both hemispheres 23.9
Parahippocampal cortex
nTPM: 28.7
1850 Male, age 80, both hemispheres 36.1
2532 Female, age 72, left hemisphere 31.4
1933 Female, age 85, both hemispheres 29.8
2018 Male, age 76, both hemispheres 29.5
1990 Female, age 91, right hemisphere 29.3
2245 Female, age 91, both hemispheres 27.4
2250 Female, age 67, right hemisphere 26.9
2693 Female, age 94, both hemispheres 26.3
2692 Male, age 74, both hemispheres 25.7
2622 Female, age 67, right hemisphere 24.5
Perirhinal gyrus
nTPM: 32.2
1847 Female, age 91, left hemisphere 34.8
1794 Male, age 80, right hemisphere 33.8
1841 Female, age 85, right hemisphere 33.3
2848 Male, age 76, right hemisphere 31.2
2521 Female, age 94, right hemisphere 28.1
Subiculum
nTPM: 26.9
2438 Female, age 94, left hemisphere 30.2
1977 Female, age 85, both hemispheres 29.6
1901 Male, age 80, both hemispheres 27.7
2619 Male, age 74, both hemispheres 26.5
2042 Male, age 76, both hemispheres 25.4
2729 Female, age 91, right hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 49.2
Min nTPM: 16.8
Std nTPM: 5.7
Median nTPM: 26.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 49.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 47.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 45.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 40.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 40.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 39.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 38.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 38.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.9
FF:10169-103B7 60 years, female 111.9
FF:10153-102I9 76 years, female 99.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 37.1
Sample A Female 53.8
Sample B Female 46.7
Sample C Male 44.0
Sample D Male 37.1
Entorhinal cortex
nTPM: 45.9
Samples: 4

Max nTPM: 51.7
Min nTPM: 42.4
Sample A Female 51.7
Sample B Female 46.4
Sample C Male 42.9
Sample D Male 42.4
Subiculum
nTPM: 39.0
Samples: 4

Max nTPM: 44.8
Min nTPM: 35.4
Sample A Female 44.8
Sample B Female 35.9
Sample C Male 35.4
Sample D Male 39.9
Ventral hippocampus
nTPM: 40.5
Samples: 4

Max nTPM: 47.9
Min nTPM: 32.9
Sample A Female 41.3
Sample B Female 32.9
Sample C Male 39.9
Sample D Male 47.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 59.2
Min nTPM: 52.6
Sample A Male 56.9
Sample B Male 58.0
Sample C Female 59.2
Sample D Female 52.6
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 62.0
Min nTPM: 53.7
Sample A Male 62.0
Sample B Male 55.5
Sample C Female 61.1
Sample D Female 53.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69015649 Antisense, RP_050315_01_D09, Mouse strain C57BL/6J (56 days, male) 2.2

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