HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.8 nTPM
HPA:25.8 nTPM
GTEx:24.8 nTPM
FANTOM5:14.3 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:39.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038769
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.8
1898 Male, age 80, left hemisphere 26.4
1855 Male, age 76, left hemisphere 25.0
2148 Female, age 91, left hemisphere 24.5
2529 Female, age 94, left hemisphere 24.5
2621 Female, age 67, right hemisphere 24.5
1911 Female, age 85, right hemisphere 23.6
Dentate gyrus
nTPM: 25.3
2010 Male, age 76, both hemispheres 26.2
2246 Female, age 85, both hemispheres 25.8
2530 Female, age 94, left hemisphere 25.6
1927 Female, age 91, both hemispheres 25.0
2528 Male, age 74, both hemispheres 24.9
2531 Female, age 67, both hemispheres 24.1
Entorhinal gyrus
nTPM: 24.5
2764 Male, age 80, right hemisphere 25.5
2117 Female, age 91, right hemisphere 24.9
1938 Female, age 85, left hemisphere 24.7
1787 Male, age 76, left hemisphere 24.3
2686 Male, age 75, right hemisphere 23.9
2613 Female, age 94, left hemisphere 23.8
Hippocampus, CA1
nTPM: 25.6
2749 Male, age 80, left hemisphere 28.2
2082 Female, age 91, right hemisphere 25.9
1873 Female, age 85, both hemispheres 25.3
2527 Male, age 74, both hemispheres 24.6
2045 Male, age 76, both hemispheres 24.1
Hippocampus, CA2
nTPM: 25.8
1963 Male, age 80, left hemisphere 27.5
1892 Male, age 76, both hemispheres 26.3
1940 Female, age 85, left hemisphere 25.3
2113 Female, age 91, right hemisphere 25.3
2249 Male, age 74, both hemispheres 25.2
2437 Female, age 94, left hemisphere 25.1
Hippocampus, CA3
nTPM: 24.9
2137 Male, age 80, left hemisphere 27.1
1867 Male, age 76, both hemispheres 26.3
1891 Female, age 85, both hemispheres 24.7
2436 Male, age 74, both hemispheres 24.5
2620 Female, age 94, left hemisphere 24.3
2861 Female, age 67, both hemispheres 22.7
Parahippocampal cortex
nTPM: 24.6
2018 Male, age 76, both hemispheres 26.8
1990 Female, age 91, right hemisphere 25.7
1933 Female, age 85, both hemispheres 25.4
1850 Male, age 80, both hemispheres 25.2
2250 Female, age 67, right hemisphere 25.0
2245 Female, age 91, both hemispheres 24.4
2532 Female, age 72, left hemisphere 23.4
2693 Female, age 94, both hemispheres 23.3
2692 Male, age 74, both hemispheres 23.2
2622 Female, age 67, right hemisphere 23.0
Perirhinal gyrus
nTPM: 24.7
1847 Female, age 91, left hemisphere 26.2
1794 Male, age 80, right hemisphere 25.4
1841 Female, age 85, right hemisphere 24.6
2521 Female, age 94, right hemisphere 24.2
2848 Male, age 76, right hemisphere 23.2
Subiculum
nTPM: 24.7
1977 Female, age 85, both hemispheres 26.2
1901 Male, age 80, both hemispheres 25.3
2042 Male, age 76, both hemispheres 24.7
2729 Female, age 91, right hemisphere 24.3
2619 Male, age 74, both hemispheres 24.1
2438 Female, age 94, left hemisphere 23.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 66.4
Min nTPM: 11.4
Std nTPM: 7.0
Median nTPM: 24.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 43.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 43.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 43.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 42.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 38.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 37.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 36.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.3
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 12.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 21.8
Min nTPM: 12.4
Sample A Female 21.8
Sample B Female 15.0
Sample C Male 15.4
Sample D Male 12.4
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.0
Sample A Female 13.3
Sample B Female 16.0
Sample C Male 16.3
Sample D Male 13.0
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 10.6
Sample A Female 18.6
Sample B Female 13.2
Sample C Male 13.2
Sample D Male 10.6
Ventral hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.4
Sample A Female 16.5
Sample B Female 11.4
Sample C Male 16.9
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 43.0
Min nTPM: 37.3
Sample A Male 37.3
Sample B Male 43.0
Sample C Female 38.1
Sample D Female 39.1
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 42.1
Min nTPM: 30.9
Sample A Male 41.9
Sample B Male 30.9
Sample C Female 32.2
Sample D Female 42.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68441622 Antisense, RP_041214_02_G01, Mouse strain C57BL/6J (56 days, male) 0.4

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