HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:11.8 nTPM
FANTOM5:18.0 Scaled Tags Per Million
Pig:8.8 nTPM
Mouse:9.7 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049449
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
2148 Female, age 91, left hemisphere 15.6
2621 Female, age 67, right hemisphere 15.4
1855 Male, age 76, left hemisphere 14.8
1911 Female, age 85, right hemisphere 14.5
1898 Male, age 80, left hemisphere 14.4
2529 Female, age 94, left hemisphere 14.0
Dentate gyrus
nTPM: 15.7
2531 Female, age 67, both hemispheres 17.4
2528 Male, age 74, both hemispheres 16.4
2246 Female, age 85, both hemispheres 15.8
1927 Female, age 91, both hemispheres 15.4
2010 Male, age 76, both hemispheres 15.1
2530 Female, age 94, left hemisphere 14.2
Entorhinal gyrus
nTPM: 15.6
2613 Female, age 94, left hemisphere 17.2
1787 Male, age 76, left hemisphere 16.2
2764 Male, age 80, right hemisphere 15.9
1938 Female, age 85, left hemisphere 15.0
2686 Male, age 75, right hemisphere 14.9
2117 Female, age 91, right hemisphere 14.3
Hippocampus, CA1
nTPM: 16.4
2749 Male, age 80, left hemisphere 19.6
2045 Male, age 76, both hemispheres 16.5
2082 Female, age 91, right hemisphere 15.8
2527 Male, age 74, both hemispheres 15.5
1873 Female, age 85, both hemispheres 14.6
Hippocampus, CA2
nTPM: 15.6
1940 Female, age 85, left hemisphere 17.3
1892 Male, age 76, both hemispheres 16.3
2113 Female, age 91, right hemisphere 15.4
2249 Male, age 74, both hemispheres 15.2
1963 Male, age 80, left hemisphere 14.9
2437 Female, age 94, left hemisphere 14.5
Hippocampus, CA3
nTPM: 17.9
2137 Male, age 80, left hemisphere 22.4
2620 Female, age 94, left hemisphere 19.7
2861 Female, age 67, both hemispheres 18.3
2436 Male, age 74, both hemispheres 16.9
1867 Male, age 76, both hemispheres 16.3
1891 Female, age 85, both hemispheres 14.0
Parahippocampal cortex
nTPM: 15.6
2622 Female, age 67, right hemisphere 17.8
2693 Female, age 94, both hemispheres 15.8
2245 Female, age 91, both hemispheres 15.7
2250 Female, age 67, right hemisphere 15.7
1933 Female, age 85, both hemispheres 15.6
2532 Female, age 72, left hemisphere 15.6
2018 Male, age 76, both hemispheres 15.3
2692 Male, age 74, both hemispheres 15.0
1850 Male, age 80, both hemispheres 14.7
1990 Female, age 91, right hemisphere 14.4
Perirhinal gyrus
nTPM: 15.8
2521 Female, age 94, right hemisphere 16.8
1794 Male, age 80, right hemisphere 16.6
1847 Female, age 91, left hemisphere 15.8
2848 Male, age 76, right hemisphere 15.1
1841 Female, age 85, right hemisphere 14.7
Subiculum
nTPM: 14.7
1901 Male, age 80, both hemispheres 15.8
2729 Female, age 91, right hemisphere 15.2
2619 Male, age 74, both hemispheres 14.8
1977 Female, age 85, both hemispheres 14.7
2042 Male, age 76, both hemispheres 14.0
2438 Female, age 94, left hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 24.9
Min nTPM: 4.8
Std nTPM: 3.1
Median nTPM: 11.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 19.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 19.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 18.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 18.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 16.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 16.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 16.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 16.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 16.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 16.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.0
FF:10153-102I9 76 years, female 23.5
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 11.3
Min nTPM: 5.1
Sample A Female 9.2
Sample B Female 11.3
Sample C Male 5.1
Sample D Male 9.8
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.2
Sample A Female 5.8
Sample B Female 5.2
Sample C Male 6.6
Sample D Male 5.2
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.6
Sample A Female 6.7
Sample B Female 5.8
Sample C Male 5.6
Sample D Male 5.8
Ventral hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.5
Sample A Female 8.2
Sample B Female 6.5
Sample C Male 8.6
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.8
Sample A Male 9.7
Sample B Male 10.3
Sample C Female 9.9
Sample D Female 8.8
Hippocampal formation
nTPM: 9.7
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.1
Sample A Male 8.1
Sample B Male 10.7
Sample C Female 10.0
Sample D Female 10.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69236646 Antisense, RP_050329_04_B02, Mouse strain C57BL/6J (56 days, male) 2.1

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