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HIGD1A
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  • HIGD1A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:182.9 nTPM
FANTOM5:66.1 Scaled Tags Per Million
Pig:67.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043336
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 182.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 182.9
Samples: 246

Max nTPM: 506.1
Min nTPM: 81.5
Std nTPM: 51.7
Median nTPM: 175.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 506.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 470.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 404.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 397.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 326.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 318.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 284.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 275.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 270.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 263.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 258.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 257.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 255.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 255.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 250.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 250.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 247.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 245.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 245.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 242.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 239.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 239.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 238.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 238.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 235.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 235.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 234.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 233.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 232.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 228.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 228.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 227.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 227.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 223.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 222.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 221.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 219.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 218.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 217.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 216.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 215.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 215.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 214.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 213.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 212.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 211.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 210.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 210.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 210.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 210.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 210.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 209.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 209.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 208.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 207.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 206.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 205.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 205.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 205.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 204.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 203.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 203.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 203.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 202.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 202.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 201.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 201.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 201.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 201.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 198.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 198.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 198.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 196.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 195.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 194.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 194.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 194.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 194.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 193.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 193.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 192.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 192.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 192.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 191.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 191.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 191.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 190.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 190.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 190.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 190.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 189.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 187.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 187.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 187.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 186.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 186.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 185.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 185.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 185.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 184.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 184.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 183.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 183.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 183.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 182.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 182.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 182.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 181.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 181.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 181.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 181.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 181.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 180.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 179.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 178.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 178.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 177.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 176.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 176.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 176.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 176.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 175.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 175.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 174.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 174.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 174.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 173.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 173.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 172.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 172.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 172.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 171.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 171.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 171.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 171.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 170.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 169.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 169.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 167.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 166.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 166.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 166.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 165.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 165.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 165.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 164.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 164.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 164.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 163.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 162.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 162.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 162.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 162.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 160.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 160.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 160.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 160.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 160.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 160.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 160.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 159.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 159.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 159.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 158.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 158.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 158.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 157.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 157.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 157.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 157.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 156.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 156.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 156.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 156.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 156.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 155.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 155.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 154.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 154.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 154.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 153.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 153.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 153.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 153.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 153.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 152.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 152.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 151.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 151.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 151.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 151.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 151.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 151.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 150.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 149.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 149.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 148.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 148.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 147.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 146.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 146.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 146.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 145.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 145.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 143.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 143.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 141.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 141.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 140.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 140.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 140.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 139.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 138.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 137.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 137.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 137.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 135.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 134.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 133.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 131.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 131.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 131.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 129.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 129.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 128.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 127.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 127.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 125.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 124.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 123.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 122.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 122.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 121.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 118.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 117.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 116.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 111.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 111.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 109.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 106.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 99.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 97.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 66.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 66.1
FF:10164-103B2 76 years, female 66.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 67.7
Pig sample Sample description nTPM
Caudate
nTPM: 67.7
Samples: 4

Max nTPM: 73.8
Min nTPM: 61.4
Sample A Female 65.2
Sample B Female 61.4
Sample C Male 73.8
Sample D Male 70.3

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