HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:126.2 nTPM
HPA:126.2 nTPM
GTEx:192.5 nTPM
FANTOM5:24.7 Scaled Tags Per Million
Pig:171.2 nTPM
Mouse:757.7 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060952
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 126.2
Sample id Sample description nTPM
Hippocampus
nTPM: 101.0
2621 Female, age 67, right hemisphere 154.2
2529 Female, age 94, left hemisphere 145.6
1911 Female, age 85, right hemisphere 134.2
2148 Female, age 91, left hemisphere 91.9
1898 Male, age 80, left hemisphere 48.4
1855 Male, age 76, left hemisphere 31.7
Dentate gyrus
nTPM: 76.7
2531 Female, age 67, both hemispheres 193.6
1927 Female, age 91, both hemispheres 100.2
2528 Male, age 74, both hemispheres 68.8
2246 Female, age 85, both hemispheres 62.7
2010 Male, age 76, both hemispheres 19.9
2530 Female, age 94, left hemisphere 15.2
Entorhinal gyrus
nTPM: 96.2
2613 Female, age 94, left hemisphere 149.9
2686 Male, age 75, right hemisphere 109.1
1787 Male, age 76, left hemisphere 98.2
1938 Female, age 85, left hemisphere 90.2
2764 Male, age 80, right hemisphere 85.5
2117 Female, age 91, right hemisphere 44.6
Hippocampus, CA1
nTPM: 94.9
2749 Male, age 80, left hemisphere 163.1
2527 Male, age 74, both hemispheres 115.4
2082 Female, age 91, right hemisphere 83.8
2045 Male, age 76, both hemispheres 56.2
1873 Female, age 85, both hemispheres 55.9
Hippocampus, CA2
nTPM: 64.2
2113 Female, age 91, right hemisphere 120.2
2249 Male, age 74, both hemispheres 64.8
2437 Female, age 94, left hemisphere 58.0
1940 Female, age 85, left hemisphere 55.1
1963 Male, age 80, left hemisphere 50.1
1892 Male, age 76, both hemispheres 37.2
Hippocampus, CA3
nTPM: 120.5
2137 Male, age 80, left hemisphere 204.7
2620 Female, age 94, left hemisphere 165.0
2861 Female, age 67, both hemispheres 149.2
1891 Female, age 85, both hemispheres 77.2
2436 Male, age 74, both hemispheres 69.3
1867 Male, age 76, both hemispheres 57.6
Parahippocampal cortex
nTPM: 108.3
2245 Female, age 91, both hemispheres 185.8
2250 Female, age 67, right hemisphere 157.4
1933 Female, age 85, both hemispheres 117.4
2622 Female, age 67, right hemisphere 116.7
2693 Female, age 94, both hemispheres 104.8
2018 Male, age 76, both hemispheres 89.8
1850 Male, age 80, both hemispheres 85.7
1990 Female, age 91, right hemisphere 78.7
2692 Male, age 74, both hemispheres 77.7
2532 Female, age 72, left hemisphere 69.4
Perirhinal gyrus
nTPM: 126.2
1847 Female, age 91, left hemisphere 177.9
2521 Female, age 94, right hemisphere 143.8
1794 Male, age 80, right hemisphere 116.9
1841 Female, age 85, right hemisphere 116.5
2848 Male, age 76, right hemisphere 75.9
Subiculum
nTPM: 71.4
2619 Male, age 74, both hemispheres 96.8
1901 Male, age 80, both hemispheres 83.0
1977 Female, age 85, both hemispheres 81.5
2729 Female, age 91, right hemisphere 66.4
2042 Male, age 76, both hemispheres 58.4
2438 Female, age 94, left hemisphere 42.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 192.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 192.5
Samples: 197

Max nTPM: 943.8
Min nTPM: 5.3
Std nTPM: 163.8
Median nTPM: 147.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 943.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 786.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 750.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 732.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 665.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 616.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 603.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 582.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 553.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 523.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 480.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.7
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 23.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 171.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.0
Samples: 4

Max nTPM: 108.7
Min nTPM: 66.4
Sample A Female 106.6
Sample B Female 108.7
Sample C Male 86.2
Sample D Male 66.4
Entorhinal cortex
nTPM: 171.2
Samples: 4

Max nTPM: 245.5
Min nTPM: 120.4
Sample A Female 173.7
Sample B Female 145.2
Sample C Male 245.5
Sample D Male 120.4
Subiculum
nTPM: 169.6
Samples: 4

Max nTPM: 202.6
Min nTPM: 144.4
Sample A Female 202.6
Sample B Female 179.4
Sample C Male 151.8
Sample D Male 144.4
Ventral hippocampus
nTPM: 86.0
Samples: 4

Max nTPM: 114.5
Min nTPM: 47.4
Sample A Female 47.4
Sample B Female 94.3
Sample C Male 87.9
Sample D Male 114.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 757.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 559.2
Samples: 4

Max nTPM: 613.4
Min nTPM: 484.5
Sample A Male 557.6
Sample B Male 484.5
Sample C Female 613.4
Sample D Female 581.4
Hippocampal formation
nTPM: 757.7
Samples: 4

Max nTPM: 828.2
Min nTPM: 683.7
Sample A Male 800.0
Sample B Male 828.2
Sample C Female 718.8
Sample D Female 683.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
74579467 Antisense, RP_060215_01_D04, Mouse strain C57BL/6J (56 days, male) 17.6
71212512 Antisense, RP_050816_03_D06, Mouse strain C57BL/6J (56 days, male) 9.7
73636031 Antisense, RP_050816_03_D06, Mouse strain C57BL/6J (56 days, male) 8.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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