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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:151.7 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Pig:212.8 nTPM

CAUDATE - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA060952
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 151.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 151.7
Samples: 246

Max nTPM: 525.6
Min nTPM: 4.4
Std nTPM: 87.8
Median nTPM: 139.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 525.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 416.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 378.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 378.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 373.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 356.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 349.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 333.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 330.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 323.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 320.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 317.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 316.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 308.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 306.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 306.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 301.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 291.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 290.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 286.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 283.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 282.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 272.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 272.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 271.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 267.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 266.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 261.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 260.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 259.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 257.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 247.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 246.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 245.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 245.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 242.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 242.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 239.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 236.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 236.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 235.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 235.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 234.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 232.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 231.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 229.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 228.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 226.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 225.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 224.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 222.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 222.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 221.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 220.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 219.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 219.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 217.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 215.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 214.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 212.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 212.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 212.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 210.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 210.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 208.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 206.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 204.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 201.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 199.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 199.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 199.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 198.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 198.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 198.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 194.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 193.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 190.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 189.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 189.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 186.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 183.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 183.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 182.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 181.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 179.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 177.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 173.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 169.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 169.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 168.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 167.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 166.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 166.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 164.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 163.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 163.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 161.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 160.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 159.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 157.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 154.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 154.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 151.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 151.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 150.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 150.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 150.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 149.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 149.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 148.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 147.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 146.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 144.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 143.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 142.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 141.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 141.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 141.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 140.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 140.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 140.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 139.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 139.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 139.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 138.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 138.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 135.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 135.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 134.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 134.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 131.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 131.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 129.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 128.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 127.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 126.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 123.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 122.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 122.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 121.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 118.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 118.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 118.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 117.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 117.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 116.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 115.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 115.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 114.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 112.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 112.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 111.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 109.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 109.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 107.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 106.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 103.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 102.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 102.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 101.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 101.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 98.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 98.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 94.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 94.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 94.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 92.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 89.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 88.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 87.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 87.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 86.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 85.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 85.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 82.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 80.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 79.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 79.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 79.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 78.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 76.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 75.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 75.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 71.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 70.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 70.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 69.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 67.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 66.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 66.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 64.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 63.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 62.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 62.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 61.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 58.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 58.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 56.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 51.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 47.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 47.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 46.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 44.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 42.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 39.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 38.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 37.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 36.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 36.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 31.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 26.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 24.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 24.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 24.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 18.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 17.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 27.7
FF:10164-103B2 76 years, female 27.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 212.8
Pig sample Sample description nTPM
Caudate
nTPM: 212.9
Samples: 4

Max nTPM: 251.8
Min nTPM: 161.3
Sample A Female 161.3
Sample B Female 235.7
Sample C Male 251.8
Sample D Male 202.6

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