HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.6 nTPM
HPA:18.6 nTPM
GTEx:26.0 nTPM
FANTOM5:11.0 Scaled Tags Per Million
Pig:52.8 nTPM
Mouse:46.2 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
2529 Female, age 94, left hemisphere 12.2
1855 Male, age 76, left hemisphere 12.0
1898 Male, age 80, left hemisphere 11.2
1911 Female, age 85, right hemisphere 7.3
2621 Female, age 67, right hemisphere 5.8
2148 Female, age 91, left hemisphere 5.7
Dentate gyrus
nTPM: 7.9
2531 Female, age 67, both hemispheres 12.4
2530 Female, age 94, left hemisphere 10.4
2010 Male, age 76, both hemispheres 8.2
1927 Female, age 91, both hemispheres 7.6
2246 Female, age 85, both hemispheres 6.7
2528 Male, age 74, both hemispheres 2.3
Entorhinal gyrus
nTPM: 18.6
2613 Female, age 94, left hemisphere 27.5
2686 Male, age 75, right hemisphere 25.4
2764 Male, age 80, right hemisphere 20.3
1787 Male, age 76, left hemisphere 16.7
1938 Female, age 85, left hemisphere 11.6
2117 Female, age 91, right hemisphere 10.3
Hippocampus, CA1
nTPM: 12.4
2749 Male, age 80, left hemisphere 25.2
2045 Male, age 76, both hemispheres 16.4
2082 Female, age 91, right hemisphere 9.5
2527 Male, age 74, both hemispheres 8.6
1873 Female, age 85, both hemispheres 2.2
Hippocampus, CA2
nTPM: 9.7
1892 Male, age 76, both hemispheres 18.6
2437 Female, age 94, left hemisphere 17.4
2113 Female, age 91, right hemisphere 8.4
1963 Male, age 80, left hemisphere 6.0
1940 Female, age 85, left hemisphere 5.3
2249 Male, age 74, both hemispheres 2.8
Hippocampus, CA3
nTPM: 13.6
2137 Male, age 80, left hemisphere 32.6
1867 Male, age 76, both hemispheres 19.2
2861 Female, age 67, both hemispheres 16.9
2620 Female, age 94, left hemisphere 11.6
1891 Female, age 85, both hemispheres 1.3
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 15.5
2622 Female, age 67, right hemisphere 25.9
2693 Female, age 94, both hemispheres 21.5
2245 Female, age 91, both hemispheres 20.1
1933 Female, age 85, both hemispheres 18.4
2250 Female, age 67, right hemisphere 15.3
2018 Male, age 76, both hemispheres 15.0
2532 Female, age 72, left hemisphere 11.6
1990 Female, age 91, right hemisphere 10.1
2692 Male, age 74, both hemispheres 8.9
1850 Male, age 80, both hemispheres 8.0
Perirhinal gyrus
nTPM: 16.8
2521 Female, age 94, right hemisphere 25.5
1794 Male, age 80, right hemisphere 17.9
1847 Female, age 91, left hemisphere 16.7
2848 Male, age 76, right hemisphere 14.4
1841 Female, age 85, right hemisphere 9.5
Subiculum
nTPM: 8.3
1901 Male, age 80, both hemispheres 13.6
1977 Female, age 85, both hemispheres 9.6
2619 Male, age 74, both hemispheres 8.0
2729 Female, age 91, right hemisphere 6.6
2438 Female, age 94, left hemisphere 6.1
2042 Male, age 76, both hemispheres 5.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 62.8
Min nTPM: 2.0
Std nTPM: 11.0
Median nTPM: 26.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 62.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 58.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 49.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 49.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 48.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 45.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 43.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 43.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 43.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.0
FF:10153-102I9 76 years, female 14.7
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 45.6
Min nTPM: 27.0
Sample A Female 45.6
Sample B Female 38.2
Sample C Male 35.0
Sample D Male 27.0
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 62.7
Min nTPM: 46.3
Sample A Female 55.3
Sample B Female 46.8
Sample C Male 62.7
Sample D Male 46.3
Subiculum
nTPM: 40.9
Samples: 4

Max nTPM: 59.1
Min nTPM: 31.6
Sample A Female 59.1
Sample B Female 33.9
Sample C Male 39.0
Sample D Male 31.6
Ventral hippocampus
nTPM: 40.5
Samples: 4

Max nTPM: 50.3
Min nTPM: 29.9
Sample A Female 36.8
Sample B Female 29.9
Sample C Male 50.3
Sample D Male 45.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 55.1
Min nTPM: 39.6
Sample A Male 49.0
Sample B Male 55.1
Sample C Female 39.6
Sample D Female 41.0
Hippocampal formation
nTPM: 39.0
Samples: 4

Max nTPM: 45.2
Min nTPM: 27.4
Sample A Male 27.4
Sample B Male 44.0
Sample C Female 39.5
Sample D Female 45.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
71283681 Antisense, RP_050825_01_C11, Mouse strain C57BL/6J (56 days, male) 5.7

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