HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:15.6 nTPM
FANTOM5:134.0 Scaled Tags Per Million
Pig:53.2 nTPM
Mouse:25.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043752Antibody HPA050345
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
1898 Male, age 80, left hemisphere 12.7
2148 Female, age 91, left hemisphere 12.3
2621 Female, age 67, right hemisphere 12.3
1855 Male, age 76, left hemisphere 12.1
1911 Female, age 85, right hemisphere 11.8
2529 Female, age 94, left hemisphere 11.5
Dentate gyrus
nTPM: 12.2
2010 Male, age 76, both hemispheres 12.8
1927 Female, age 91, both hemispheres 12.7
2246 Female, age 85, both hemispheres 12.1
2530 Female, age 94, left hemisphere 12.0
2528 Male, age 74, both hemispheres 11.8
2531 Female, age 67, both hemispheres 11.7
Entorhinal gyrus
nTPM: 11.8
1787 Male, age 76, left hemisphere 12.2
2117 Female, age 91, right hemisphere 11.9
2613 Female, age 94, left hemisphere 11.8
1938 Female, age 85, left hemisphere 11.7
2764 Male, age 80, right hemisphere 11.7
2686 Male, age 75, right hemisphere 11.6
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 14.9
1873 Female, age 85, both hemispheres 12.1
2527 Male, age 74, both hemispheres 12.1
2045 Male, age 76, both hemispheres 12.0
2082 Female, age 91, right hemisphere 11.6
Hippocampus, CA2
nTPM: 12.3
1892 Male, age 76, both hemispheres 13.3
1963 Male, age 80, left hemisphere 13.2
2249 Male, age 74, both hemispheres 12.1
2113 Female, age 91, right hemisphere 11.9
1940 Female, age 85, left hemisphere 11.7
2437 Female, age 94, left hemisphere 11.7
Hippocampus, CA3
nTPM: 12.4
2137 Male, age 80, left hemisphere 13.2
2436 Male, age 74, both hemispheres 12.5
1867 Male, age 76, both hemispheres 12.3
2620 Female, age 94, left hemisphere 12.2
1891 Female, age 85, both hemispheres 12.1
2861 Female, age 67, both hemispheres 12.1
Parahippocampal cortex
nTPM: 11.9
2692 Male, age 74, both hemispheres 12.5
1933 Female, age 85, both hemispheres 12.2
2622 Female, age 67, right hemisphere 12.1
1990 Female, age 91, right hemisphere 12.0
2018 Male, age 76, both hemispheres 11.9
2532 Female, age 72, left hemisphere 11.9
2693 Female, age 94, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.8
1850 Male, age 80, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.5
Perirhinal gyrus
nTPM: 11.9
1847 Female, age 91, left hemisphere 12.3
1841 Female, age 85, right hemisphere 12.2
1794 Male, age 80, right hemisphere 11.9
2848 Male, age 76, right hemisphere 11.8
2521 Female, age 94, right hemisphere 11.6
Subiculum
nTPM: 12.1
1901 Male, age 80, both hemispheres 12.6
2619 Male, age 74, both hemispheres 12.4
1977 Female, age 85, both hemispheres 12.0
2438 Female, age 94, left hemisphere 12.0
2729 Female, age 91, right hemisphere 12.0
2042 Male, age 76, both hemispheres 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 37.2
Min nTPM: 5.4
Std nTPM: 4.7
Median nTPM: 15.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 29.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 27.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 26.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 25.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 24.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 24.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 134.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 134.0
FF:10169-103B7 60 years, female 183.1
FF:10153-102I9 76 years, female 84.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.2
Samples: 4

Max nTPM: 68.3
Min nTPM: 43.1
Sample A Female 68.3
Sample B Female 50.8
Sample C Male 50.7
Sample D Male 43.1
Entorhinal cortex
nTPM: 51.3
Samples: 4

Max nTPM: 61.3
Min nTPM: 43.3
Sample A Female 51.2
Sample B Female 61.3
Sample C Male 49.5
Sample D Male 43.3
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 55.2
Min nTPM: 38.2
Sample A Female 55.2
Sample B Female 40.1
Sample C Male 41.4
Sample D Male 38.2
Ventral hippocampus
nTPM: 48.3
Samples: 4

Max nTPM: 53.8
Min nTPM: 37.9
Sample A Female 52.3
Sample B Female 37.9
Sample C Male 53.8
Sample D Male 49.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 26.6
Min nTPM: 21.9
Sample A Male 22.7
Sample B Male 26.6
Sample C Female 25.0
Sample D Female 21.9
Hippocampal formation
nTPM: 25.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 20.3
Sample A Male 30.1
Sample B Male 23.8
Sample C Female 20.3
Sample D Female 25.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68162218 Antisense, RP_041122_01_H06, Mouse strain C57BL/6J (56 days, male) 0.1

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