HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:65.6 nTPM
HPA:65.6 nTPM
GTEx:69.3 nTPM
FANTOM5:125.7 Scaled Tags Per Million
Pig:50.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018527
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.6
Sample id Sample description nTPM
Hippocampus
nTPM: 61.6
1898 Male, age 80, left hemisphere 66.1
1855 Male, age 76, left hemisphere 64.4
1911 Female, age 85, right hemisphere 61.2
2529 Female, age 94, left hemisphere 60.7
2148 Female, age 91, left hemisphere 59.1
2621 Female, age 67, right hemisphere 58.4
Dentate gyrus
nTPM: 62.3
2010 Male, age 76, both hemispheres 66.3
1927 Female, age 91, both hemispheres 65.4
2528 Male, age 74, both hemispheres 62.5
2530 Female, age 94, left hemisphere 62.0
2246 Female, age 85, both hemispheres 61.1
2531 Female, age 67, both hemispheres 56.2
Entorhinal gyrus
nTPM: 60.7
1938 Female, age 85, left hemisphere 65.3
1787 Male, age 76, left hemisphere 61.7
2764 Male, age 80, right hemisphere 61.6
2117 Female, age 91, right hemisphere 60.7
2613 Female, age 94, left hemisphere 57.5
2686 Male, age 75, right hemisphere 57.5
Hippocampus, CA1
nTPM: 63.2
2749 Male, age 80, left hemisphere 65.6
1873 Female, age 85, both hemispheres 64.8
2045 Male, age 76, both hemispheres 62.2
2527 Male, age 74, both hemispheres 62.1
2082 Female, age 91, right hemisphere 61.6
Hippocampus, CA2
nTPM: 63.8
2249 Male, age 74, both hemispheres 69.7
1892 Male, age 76, both hemispheres 66.9
1963 Male, age 80, left hemisphere 65.4
1940 Female, age 85, left hemisphere 61.8
2113 Female, age 91, right hemisphere 59.5
2437 Female, age 94, left hemisphere 59.3
Hippocampus, CA3
nTPM: 61.6
2436 Male, age 74, both hemispheres 67.2
1867 Male, age 76, both hemispheres 64.8
2137 Male, age 80, left hemisphere 63.8
1891 Female, age 85, both hemispheres 62.5
2620 Female, age 94, left hemisphere 56.2
2861 Female, age 67, both hemispheres 55.3
Parahippocampal cortex
nTPM: 61.6
1850 Male, age 80, both hemispheres 67.6
1933 Female, age 85, both hemispheres 64.5
2018 Male, age 76, both hemispheres 64.3
2250 Female, age 67, right hemisphere 62.3
1990 Female, age 91, right hemisphere 62.1
2693 Female, age 94, both hemispheres 61.3
2245 Female, age 91, both hemispheres 59.9
2532 Female, age 72, left hemisphere 59.3
2692 Male, age 74, both hemispheres 58.5
2622 Female, age 67, right hemisphere 56.0
Perirhinal gyrus
nTPM: 65.6
1847 Female, age 91, left hemisphere 68.3
1841 Female, age 85, right hemisphere 68.2
2848 Male, age 76, right hemisphere 65.3
1794 Male, age 80, right hemisphere 64.6
2521 Female, age 94, right hemisphere 61.7
Subiculum
nTPM: 60.8
1977 Female, age 85, both hemispheres 64.1
2042 Male, age 76, both hemispheres 62.8
1901 Male, age 80, both hemispheres 61.4
2729 Female, age 91, right hemisphere 59.7
2438 Female, age 94, left hemisphere 59.6
2619 Male, age 74, both hemispheres 57.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.3
Samples: 197

Max nTPM: 140.9
Min nTPM: 22.5
Std nTPM: 14.5
Median nTPM: 68.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 140.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 140.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 105.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 94.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 94.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 94.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 93.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 90.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 90.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 89.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.7
FF:10169-103B7 60 years, female 147.5
FF:10153-102I9 76 years, female 103.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.0
Samples: 4

Max nTPM: 69.7
Min nTPM: 33.6
Sample A Female 69.7
Sample B Female 47.6
Sample C Male 52.9
Sample D Male 33.6
Entorhinal cortex
nTPM: 33.2
Samples: 4

Max nTPM: 40.8
Min nTPM: 29.0
Sample A Female 30.6
Sample B Female 40.8
Sample C Male 32.4
Sample D Male 29.0
Subiculum
nTPM: 36.5
Samples: 4

Max nTPM: 45.1
Min nTPM: 30.9
Sample A Female 45.1
Sample B Female 37.0
Sample C Male 30.9
Sample D Male 32.8
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 47.1
Min nTPM: 31.7
Sample A Female 46.6
Sample B Female 31.7
Sample C Male 39.1
Sample D Male 47.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.