HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:120.7 nTPM
HPA:120.7 nTPM
GTEx:83.4 nTPM
FANTOM5:97.6 Scaled Tags Per Million
Pig:47.2 nTPM
Mouse:62.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059198
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 120.7
Sample id Sample description nTPM
Hippocampus
nTPM: 120.0
1898 Male, age 80, left hemisphere 124.0
1855 Male, age 76, left hemisphere 123.1
2621 Female, age 67, right hemisphere 120.8
2529 Female, age 94, left hemisphere 119.3
2148 Female, age 91, left hemisphere 116.4
1911 Female, age 85, right hemisphere 116.1
Dentate gyrus
nTPM: 119.0
2010 Male, age 76, both hemispheres 122.4
1927 Female, age 91, both hemispheres 120.2
2530 Female, age 94, left hemisphere 120.1
2246 Female, age 85, both hemispheres 119.0
2528 Male, age 74, both hemispheres 117.0
2531 Female, age 67, both hemispheres 115.1
Entorhinal gyrus
nTPM: 117.6
1787 Male, age 76, left hemisphere 121.4
1938 Female, age 85, left hemisphere 120.0
2117 Female, age 91, right hemisphere 117.9
2764 Male, age 80, right hemisphere 117.9
2613 Female, age 94, left hemisphere 114.4
2686 Male, age 75, right hemisphere 114.2
Hippocampus, CA1
nTPM: 120.7
2749 Male, age 80, left hemisphere 127.0
2045 Male, age 76, both hemispheres 121.5
2527 Male, age 74, both hemispheres 120.7
1873 Female, age 85, both hemispheres 120.0
2082 Female, age 91, right hemisphere 114.3
Hippocampus, CA2
nTPM: 120.0
1892 Male, age 76, both hemispheres 123.7
2249 Male, age 74, both hemispheres 122.3
1963 Male, age 80, left hemisphere 120.8
2437 Female, age 94, left hemisphere 120.6
2113 Female, age 91, right hemisphere 116.6
1940 Female, age 85, left hemisphere 115.8
Hippocampus, CA3
nTPM: 119.4
1867 Male, age 76, both hemispheres 123.2
2137 Male, age 80, left hemisphere 121.4
2436 Male, age 74, both hemispheres 120.7
1891 Female, age 85, both hemispheres 119.4
2620 Female, age 94, left hemisphere 118.3
2861 Female, age 67, both hemispheres 113.2
Parahippocampal cortex
nTPM: 118.4
2250 Female, age 67, right hemisphere 123.7
2018 Male, age 76, both hemispheres 123.1
1850 Male, age 80, both hemispheres 119.8
2245 Female, age 91, both hemispheres 118.6
1933 Female, age 85, both hemispheres 118.2
1990 Female, age 91, right hemisphere 117.9
2532 Female, age 72, left hemisphere 117.9
2693 Female, age 94, both hemispheres 116.6
2692 Male, age 74, both hemispheres 114.7
2622 Female, age 67, right hemisphere 113.6
Perirhinal gyrus
nTPM: 120.1
1847 Female, age 91, left hemisphere 121.5
1794 Male, age 80, right hemisphere 120.3
2521 Female, age 94, right hemisphere 120.2
1841 Female, age 85, right hemisphere 119.7
2848 Male, age 76, right hemisphere 118.8
Subiculum
nTPM: 120.3
2042 Male, age 76, both hemispheres 123.3
2438 Female, age 94, left hemisphere 122.7
2619 Male, age 74, both hemispheres 121.0
1901 Male, age 80, both hemispheres 119.4
1977 Female, age 85, both hemispheres 119.2
2729 Female, age 91, right hemisphere 116.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.4
Samples: 197

Max nTPM: 182.8
Min nTPM: 46.5
Std nTPM: 23.0
Median nTPM: 79.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 182.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 167.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 165.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 163.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 155.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 143.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 143.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 141.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 139.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 134.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 132.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.6
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 73.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 66.1
Min nTPM: 38.4
Sample A Female 66.1
Sample B Female 43.6
Sample C Male 40.6
Sample D Male 38.4
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 46.2
Min nTPM: 29.5
Sample A Female 46.2
Sample B Female 45.0
Sample C Male 36.5
Sample D Male 29.5
Subiculum
nTPM: 40.3
Samples: 4

Max nTPM: 53.9
Min nTPM: 31.8
Sample A Female 53.9
Sample B Female 40.2
Sample C Male 31.8
Sample D Male 35.3
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 46.6
Min nTPM: 33.6
Sample A Female 46.6
Sample B Female 33.6
Sample C Male 44.2
Sample D Male 42.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 67.9
Min nTPM: 49.4
Sample A Male 49.4
Sample B Male 64.5
Sample C Female 67.9
Sample D Female 54.6
Hippocampal formation
nTPM: 62.5
Samples: 4

Max nTPM: 71.3
Min nTPM: 57.2
Sample A Male 71.3
Sample B Male 59.1
Sample C Female 62.2
Sample D Female 57.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75042268 Antisense, RP_060412_02_D10, Mouse strain C57BL/6J (56 days, male) 0.4
69549190 Antisense, RP_050120_01_B12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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