HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:210.3 nTPM
HPA:210.3 nTPM
GTEx:170.6 nTPM
FANTOM5:32.7 Scaled Tags Per Million
Pig:77.3 nTPM
Mouse:119.1 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024550Antibody HPA027160
Glial cells MediumMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 210.3
Sample id Sample description nTPM
Hippocampus
nTPM: 208.6
2529 Female, age 94, left hemisphere 223.9
2148 Female, age 91, left hemisphere 213.6
1898 Male, age 80, left hemisphere 209.6
2621 Female, age 67, right hemisphere 206.8
1911 Female, age 85, right hemisphere 203.8
1855 Male, age 76, left hemisphere 193.6
Dentate gyrus
nTPM: 203.0
2531 Female, age 67, both hemispheres 233.9
1927 Female, age 91, both hemispheres 208.1
2528 Male, age 74, both hemispheres 201.2
2530 Female, age 94, left hemisphere 198.5
2010 Male, age 76, both hemispheres 192.8
2246 Female, age 85, both hemispheres 183.5
Entorhinal gyrus
nTPM: 210.3
2764 Male, age 80, right hemisphere 222.0
2686 Male, age 75, right hemisphere 220.8
2613 Female, age 94, left hemisphere 219.1
1787 Male, age 76, left hemisphere 205.7
2117 Female, age 91, right hemisphere 199.9
1938 Female, age 85, left hemisphere 194.1
Hippocampus, CA1
nTPM: 206.3
2749 Male, age 80, left hemisphere 225.1
2527 Male, age 74, both hemispheres 215.2
2082 Female, age 91, right hemisphere 206.1
2045 Male, age 76, both hemispheres 197.7
1873 Female, age 85, both hemispheres 187.6
Hippocampus, CA2
nTPM: 198.0
2113 Female, age 91, right hemisphere 210.5
2249 Male, age 74, both hemispheres 204.2
1963 Male, age 80, left hemisphere 203.7
1892 Male, age 76, both hemispheres 196.6
2437 Female, age 94, left hemisphere 188.2
1940 Female, age 85, left hemisphere 185.1
Hippocampus, CA3
nTPM: 208.2
2861 Female, age 67, both hemispheres 244.3
2137 Male, age 80, left hemisphere 217.5
2620 Female, age 94, left hemisphere 207.4
1867 Male, age 76, both hemispheres 202.6
2436 Male, age 74, both hemispheres 193.9
1891 Female, age 85, both hemispheres 183.5
Parahippocampal cortex
nTPM: 205.1
2622 Female, age 67, right hemisphere 224.3
2018 Male, age 76, both hemispheres 214.4
2250 Female, age 67, right hemisphere 213.0
2245 Female, age 91, both hemispheres 210.8
1933 Female, age 85, both hemispheres 203.5
2692 Male, age 74, both hemispheres 202.5
1990 Female, age 91, right hemisphere 201.1
2532 Female, age 72, left hemisphere 199.1
2693 Female, age 94, both hemispheres 192.1
1850 Male, age 80, both hemispheres 190.1
Perirhinal gyrus
nTPM: 199.7
1794 Male, age 80, right hemisphere 208.4
2521 Female, age 94, right hemisphere 205.6
1847 Female, age 91, left hemisphere 201.6
2848 Male, age 76, right hemisphere 192.3
1841 Female, age 85, right hemisphere 190.3
Subiculum
nTPM: 192.4
2619 Male, age 74, both hemispheres 203.8
1977 Female, age 85, both hemispheres 201.0
1901 Male, age 80, both hemispheres 198.7
2729 Female, age 91, right hemisphere 198.6
2042 Male, age 76, both hemispheres 187.2
2438 Female, age 94, left hemisphere 165.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 170.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 170.6
Samples: 197

Max nTPM: 396.7
Min nTPM: 36.0
Std nTPM: 64.4
Median nTPM: 161.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 396.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 365.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 336.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 331.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 322.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 321.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 314.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 311.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 304.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 298.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 292.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.7
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 31.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.3
Samples: 4

Max nTPM: 100.4
Min nTPM: 55.6
Sample A Female 100.4
Sample B Female 68.2
Sample C Male 85.0
Sample D Male 55.6
Entorhinal cortex
nTPM: 61.7
Samples: 4

Max nTPM: 68.0
Min nTPM: 48.6
Sample A Female 62.5
Sample B Female 67.8
Sample C Male 68.0
Sample D Male 48.6
Subiculum
nTPM: 61.9
Samples: 4

Max nTPM: 81.0
Min nTPM: 53.3
Sample A Female 81.0
Sample B Female 59.5
Sample C Male 53.3
Sample D Male 53.9
Ventral hippocampus
nTPM: 71.8
Samples: 4

Max nTPM: 90.2
Min nTPM: 52.4
Sample A Female 75.7
Sample B Female 52.4
Sample C Male 90.2
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 119.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 118.6
Samples: 4

Max nTPM: 134.2
Min nTPM: 96.7
Sample A Male 117.0
Sample B Male 126.3
Sample C Female 134.2
Sample D Female 96.7
Hippocampal formation
nTPM: 119.1
Samples: 4

Max nTPM: 142.5
Min nTPM: 103.8
Sample A Male 142.5
Sample B Male 111.7
Sample C Female 103.8
Sample D Female 118.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68546311 Antisense, RP_050120_02_C12, Mouse strain C57BL/6J (56 days, male) 2.4
74300849 Antisense, RP_051219_03_H07, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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