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TMIGD1
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TISSUE SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:140.5 nTPM
HPA:140.5 nTPM
GTEx:99.9 nTPM
FANTOM5:52.0 Scaled Tags Per Million

SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 140.5
overview
Male, age 65
Small intestine sample 232
nTPM: 0.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 386.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 87.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 87.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 99.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 99.9
Samples: 187

Max nTPM: 744.0
Min nTPM: 0.0
Std nTPM: 139.0
Median nTPM: 31.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 744.0
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 581.1
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 556.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 512.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 512.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 430.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 428.9
GTEX-ZTSS-0926-SM-59865 40-49 years, male 402.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 392.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 370.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 366.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 363.0
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 358.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 355.6
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 354.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 345.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 337.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 335.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 331.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 323.4
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 304.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 294.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 273.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 271.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 261.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 257.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 249.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 237.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 232.9
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 231.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 226.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 223.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 218.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 217.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 213.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 209.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 203.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 192.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 192.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 190.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 181.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 178.3
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 173.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 171.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 163.9
GTEX-144GM-1026-SM-79OKU 20-29 years, male 157.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 155.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 151.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 140.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 140.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 136.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 135.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 133.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 132.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 128.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 117.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 117.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 117.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 116.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 106.3
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 101.7
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 98.6
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 96.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 96.2
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 96.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 92.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 90.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 90.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 89.2
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 83.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 81.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 78.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 78.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 77.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 77.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 68.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 67.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 66.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 65.4
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 64.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 64.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 62.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 61.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 60.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 56.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 53.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 45.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 43.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 41.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 40.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 38.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 36.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 35.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 31.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 30.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 27.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 27.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 26.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 20.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 20.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 17.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 14.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 14.1
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 13.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 13.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 11.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 10.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 10.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 9.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 9.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 8.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 8.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 8.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 8.1
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 6.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 4.8
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 3.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 3.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 3.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 3.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 3.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 3.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 2.7
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 2.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2.4
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 2.2
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1.0
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 0.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 0.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 0.7
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 0.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 0.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 0.7
GTEX-1192X-2526-SM-59868 50-59 years, male 0.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 0.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 0.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 0.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 0.5
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 0.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 0.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 0.4
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 0.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 0.3
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 0.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 0.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 0.3
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 0.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 0.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 0.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 0.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 0.2
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 0.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 0.2
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 0.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 0.2
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 0.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 0.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 0.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 0.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 0.1
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 0.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 0.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 0.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 0.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 0.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 0.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 0.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 0.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 0.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 0.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 0.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 0.0
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 0.0
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 52.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 52.0
FF:10024-101D6 15,40,85 years, mixed 52.0

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