HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.6 nTPM
HPA:46.6 nTPM
GTEx:33.3 nTPM
FANTOM5:44.6 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:9.2 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042465
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.6
Sample id Sample description nTPM
Hippocampus
nTPM: 44.3
1898 Male, age 80, left hemisphere 46.2
2529 Female, age 94, left hemisphere 46.0
1855 Male, age 76, left hemisphere 44.6
2148 Female, age 91, left hemisphere 43.6
2621 Female, age 67, right hemisphere 43.5
1911 Female, age 85, right hemisphere 42.0
Dentate gyrus
nTPM: 44.3
2530 Female, age 94, left hemisphere 47.1
2010 Male, age 76, both hemispheres 44.8
1927 Female, age 91, both hemispheres 44.6
2246 Female, age 85, both hemispheres 44.1
2528 Male, age 74, both hemispheres 43.6
2531 Female, age 67, both hemispheres 41.8
Entorhinal gyrus
nTPM: 42.7
1787 Male, age 76, left hemisphere 44.3
1938 Female, age 85, left hemisphere 43.5
2764 Male, age 80, right hemisphere 43.3
2117 Female, age 91, right hemisphere 42.6
2613 Female, age 94, left hemisphere 41.5
2686 Male, age 75, right hemisphere 41.2
Hippocampus, CA1
nTPM: 46.6
2749 Male, age 80, left hemisphere 56.7
2527 Male, age 74, both hemispheres 45.2
1873 Female, age 85, both hemispheres 45.0
2045 Male, age 76, both hemispheres 43.5
2082 Female, age 91, right hemisphere 42.5
Hippocampus, CA2
nTPM: 44.4
1892 Male, age 76, both hemispheres 46.7
1963 Male, age 80, left hemisphere 46.4
2249 Male, age 74, both hemispheres 45.2
2113 Female, age 91, right hemisphere 43.2
2437 Female, age 94, left hemisphere 42.6
1940 Female, age 85, left hemisphere 42.3
Hippocampus, CA3
nTPM: 44.5
2137 Male, age 80, left hemisphere 50.0
2436 Male, age 74, both hemispheres 46.0
1867 Male, age 76, both hemispheres 45.2
2861 Female, age 67, both hemispheres 43.0
1891 Female, age 85, both hemispheres 41.7
2620 Female, age 94, left hemisphere 41.3
Parahippocampal cortex
nTPM: 43.3
2250 Female, age 67, right hemisphere 45.3
2245 Female, age 91, both hemispheres 44.5
1850 Male, age 80, both hemispheres 44.2
1990 Female, age 91, right hemisphere 44.1
2532 Female, age 72, left hemisphere 43.5
2018 Male, age 76, both hemispheres 43.4
1933 Female, age 85, both hemispheres 43.3
2693 Female, age 94, both hemispheres 41.9
2622 Female, age 67, right hemisphere 41.8
2692 Male, age 74, both hemispheres 41.0
Perirhinal gyrus
nTPM: 44.9
1794 Male, age 80, right hemisphere 47.8
1847 Female, age 91, left hemisphere 46.2
1841 Female, age 85, right hemisphere 44.3
2521 Female, age 94, right hemisphere 43.5
2848 Male, age 76, right hemisphere 42.9
Subiculum
nTPM: 42.9
1901 Male, age 80, both hemispheres 44.2
1977 Female, age 85, both hemispheres 43.7
2438 Female, age 94, left hemisphere 43.1
2619 Male, age 74, both hemispheres 42.5
2729 Female, age 91, right hemisphere 42.2
2042 Male, age 76, both hemispheres 41.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.3
Samples: 197

Max nTPM: 73.5
Min nTPM: 15.1
Std nTPM: 10.3
Median nTPM: 31.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 73.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 63.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 61.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 59.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 55.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 50.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 49.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.6
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 38.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.9
Sample A Female 7.4
Sample B Female 7.2
Sample C Male 6.9
Sample D Male 7.1
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 8.7
Sample C Male 7.6
Sample D Male 7.5
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 7.2
Min nTPM: 6.8
Sample A Female 7.1
Sample B Female 6.9
Sample C Male 6.8
Sample D Male 7.2
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.8
Sample A Female 7.9
Sample B Female 7.4
Sample C Male 7.8
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.2
Sample A Male 9.1
Sample B Male 9.7
Sample C Female 9.1
Sample D Female 7.2
Hippocampal formation
nTPM: 9.2
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.8
Sample A Male 9.9
Sample B Male 9.0
Sample C Female 9.2
Sample D Female 8.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69262236 Antisense, RP_050301_01_G05, Mouse strain C57BL/6J (56 days, male) 0.5

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