COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.6 nTPM
HPA:3.8 nTPM
GTEx:28.6 nTPM
FANTOM5:16.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 3.8
overview
Male, age 54 		Colon sample 67
nTPM: 2.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 2.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 12.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 28.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 28.6
Samples: 373

Max nTPM: 91.9
Min nTPM: 0.5
Std nTPM: 12.5
Median nTPM: 28.2
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 91.9
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 74.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 70.6
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 67.1
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 62.5
GTEX-1E2YA-2526-SM-7IGOU 50-59 years, male 61.1
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 58.4
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 57.3
GTEX-1R7EU-1826-SM-DTX9L 60-69 years, male 57.0
GTEX-1GF9X-1426-SM-7RHGX 40-49 years, female 56.3
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 55.8
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Colon - Transverse
Average nTPM: 13.7
Samples: 406

Max nTPM: 59.0
Min nTPM: 0.5
Std nTPM: 12.7
Median nTPM: 10.0
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 59.0
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 56.3
GTEX-11GSP-1626-SM-5986N 60-69 years, female 55.8
GTEX-17F96-2026-SM-79ON4 70-79 years, male 55.6
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 53.4
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 50.2
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 47.9
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 47.9
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 46.1
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 44.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 43.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 16.9
FF:10014-101C5 62,83,84 years, mixed 16.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.