HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.1 nTPM
HPA:24.1 nTPM
GTEx:30.5 nTPM
FANTOM5:41.3 Scaled Tags Per Million
Mouse:26.6 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005544Antibody CAB004508
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
2621 Female, age 67, right hemisphere 27.8
2529 Female, age 94, left hemisphere 23.9
1855 Male, age 76, left hemisphere 22.5
1911 Female, age 85, right hemisphere 22.3
2148 Female, age 91, left hemisphere 21.0
1898 Male, age 80, left hemisphere 20.6
Dentate gyrus
nTPM: 22.6
2531 Female, age 67, both hemispheres 26.2
2530 Female, age 94, left hemisphere 24.7
2246 Female, age 85, both hemispheres 22.2
2528 Male, age 74, both hemispheres 21.7
2010 Male, age 76, both hemispheres 20.7
1927 Female, age 91, both hemispheres 19.8
Entorhinal gyrus
nTPM: 24.1
2613 Female, age 94, left hemisphere 30.1
2686 Male, age 75, right hemisphere 25.2
1787 Male, age 76, left hemisphere 24.5
2764 Male, age 80, right hemisphere 22.9
2117 Female, age 91, right hemisphere 21.1
1938 Female, age 85, left hemisphere 20.9
Hippocampus, CA1
nTPM: 22.3
1873 Female, age 85, both hemispheres 23.1
2527 Male, age 74, both hemispheres 22.8
2749 Male, age 80, left hemisphere 22.6
2045 Male, age 76, both hemispheres 22.1
2082 Female, age 91, right hemisphere 20.9
Hippocampus, CA2
nTPM: 21.7
1963 Male, age 80, left hemisphere 24.7
1892 Male, age 76, both hemispheres 22.4
2437 Female, age 94, left hemisphere 22.2
2113 Female, age 91, right hemisphere 20.8
2249 Male, age 74, both hemispheres 20.7
1940 Female, age 85, left hemisphere 19.5
Hippocampus, CA3
nTPM: 23.9
2861 Female, age 67, both hemispheres 29.3
2620 Female, age 94, left hemisphere 29.1
2137 Male, age 80, left hemisphere 24.5
1891 Female, age 85, both hemispheres 20.8
1867 Male, age 76, both hemispheres 20.0
2436 Male, age 74, both hemispheres 19.8
Parahippocampal cortex
nTPM: 22.6
2622 Female, age 67, right hemisphere 28.4
2532 Female, age 72, left hemisphere 24.2
2245 Female, age 91, both hemispheres 23.9
2692 Male, age 74, both hemispheres 23.8
2693 Female, age 94, both hemispheres 22.2
2018 Male, age 76, both hemispheres 21.7
2250 Female, age 67, right hemisphere 21.1
1933 Female, age 85, both hemispheres 20.3
1850 Male, age 80, both hemispheres 20.1
1990 Female, age 91, right hemisphere 19.8
Perirhinal gyrus
nTPM: 22.3
2848 Male, age 76, right hemisphere 23.8
1794 Male, age 80, right hemisphere 22.9
2521 Female, age 94, right hemisphere 22.5
1847 Female, age 91, left hemisphere 21.5
1841 Female, age 85, right hemisphere 20.6
Subiculum
nTPM: 21.0
2619 Male, age 74, both hemispheres 24.2
1977 Female, age 85, both hemispheres 21.5
2042 Male, age 76, both hemispheres 21.2
2729 Female, age 91, right hemisphere 20.3
1901 Male, age 80, both hemispheres 19.7
2438 Female, age 94, left hemisphere 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.5
Samples: 197

Max nTPM: 52.6
Min nTPM: 10.4
Std nTPM: 6.9
Median nTPM: 30.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 52.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 50.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 48.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 46.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 45.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 44.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 44.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 44.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 42.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.3
FF:10153-102I9 76 years, female 55.5
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.3
Min nTPM: 22.9
Sample A Male 26.0
Sample B Male 28.0
Sample C Female 22.9
Sample D Female 29.3
Hippocampal formation
nTPM: 25.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.8
Sample A Male 24.5
Sample B Male 24.7
Sample C Female 23.8
Sample D Female 27.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
71380423 Antisense, RP_050407_03_B09, Mouse strain C57BL/6J (56 days, male) 15.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.