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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 548.8
Min nTPM: 172.3
Std nTPM: 60.5
Median nTPM:
495_1
57 years, female
548.8
35_1
74 years, female
416.6
518_1
75 years, female
403.7
405_1
91 years, male
403.3
43_1
64 years, female
386.4
142_1
61 years, female
386.0
322_1
76 years, male
380.5
139_1
64 years, female
375.3
6_1
73 years, female
373.2
217_1
76 years, male
364.0
149_1
88 years, male
361.8
413_1
59 years, female
360.6
153_1
70 years, female
357.2
81_1
67 years, male
353.3
414_1
84 years, female
352.5
415_1
77 years, female
352.4
466_1
57 years, female
347.5
491_1
89 years, female
346.5
406_1
79 years, male
346.3
501_1
88 years, male
345.1
389_1
86 years, female
343.7
526_1
61 years, male
335.4
375_1
74 years, female
331.7
4_1
88 years, female
329.7
189_1
76 years, male
327.4
137_1
83 years, male
326.3
318_1
68 years, male
325.4
316_1
62 years, male
325.1
32_1
67 years, male
323.0
324_1
76 years, male
318.5
18_1
88 years, male
316.6
218_1
71 years, female
316.1
17_1
71 years, male
314.5
126_1
63 years, male
313.1
251_1
78 years, male
308.1
291_1
76 years, male
304.1
447_1
81 years, male
303.7
468_1
89 years, male
302.9
288_1
66 years, female
302.8
145_1
84 years, male
301.5
490_1
67 years, female
301.2
321_1
62 years, female
300.3
177_1
74 years, male
299.2
377_1
82 years, female
298.8
404_1
82 years, female
294.9
307_1
66 years, female
290.5
172_1
72 years, female
290.3
480_1
63 years, male
289.8
229_1
69 years, female
287.9
117_1
61 years, male
285.3
320_1
89 years, female
284.9
319_1
81 years, male
282.8
2_1
77 years, female
278.8
120_1
70 years, female
276.7
348_1
84 years, male
275.9
425_1
59 years, female
275.8
162_1
79 years, female
275.6
386_1
76 years, male
274.7
266_1
85 years, male
273.5
379_1
60 years, male
272.2
503_1
68 years, male
271.8
314_1
67 years, male
270.9
499_1
55 years, female
268.3
315_1
62 years, female
267.5
265_1
87 years, male
264.3
173_1
67 years, male
264.1
347_1
72 years, male
264.1
89_1
63 years, male
263.4
254_1
77 years, female
262.7
396_1
62 years, male
262.6
517_1
88 years, male
259.2
163_1
78 years, male
259.0
311_1
78 years, male
256.4
376_1
75 years, female
255.2
237_1
82 years, male
254.9
246_1
77 years, male
254.5
335_1
73 years, female
254.3
352_1
62 years, male
249.5
264_1
73 years, female
248.1
354_1
81 years, female
247.6
353_1
82 years, female
246.2
308_1
70 years, female
245.1
355_1
70 years, female
239.0
350_1
84 years, female
233.1
42_1
85 years, male
232.1
452_1
88 years, female
230.4
351_1
91 years, male
229.3
384_1
83 years, male
229.3
295_1
61 years, female
227.9
115_1
83 years, male
226.8
317_1
60 years, male
222.1
119_1
70 years, female
220.5
9_1
66 years, female
218.3
109_1
81 years, female
217.3
292_1
71 years, male
214.0
313_1
79 years, female
212.9
243_1
75 years, male
211.5
286_1
68 years, female
211.2
506_1
65 years, male
196.9
41_1
94 years, female
193.3
293_1
68 years, female
192.3
394_1
75 years, female
186.9
99_1
64 years, male
185.8
349_1
83 years, male
181.0
356_1
87 years, female
172.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.