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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:172.0 nTPM
GTEx:172.0 nTPM
FANTOM5:214.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA008275
Squamous epithelial cells Not detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 172.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 172.0
Samples: 156

Max nTPM: 455.4
Min nTPM: 34.4
Std nTPM: 86.0
Median nTPM: 155.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 455.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 435.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 428.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 416.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 415.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 379.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 344.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 335.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 330.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 307.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 306.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 298.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 295.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 293.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 290.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 290.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 289.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 289.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 284.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 282.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 275.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 267.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 264.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 262.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 260.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 255.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 253.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 249.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 249.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 248.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 241.1
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 233.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 230.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 228.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 223.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 223.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 222.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 221.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 218.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 211.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 210.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 210.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 206.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 205.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 204.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 197.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 195.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 193.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 193.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 192.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 191.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 191.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 190.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 190.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 187.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 185.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 184.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 183.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 183.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 183.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 183.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 181.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 180.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 178.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 174.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 170.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 168.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 167.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 166.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 165.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 165.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 165.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 162.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 161.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 159.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 156.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 156.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 155.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 155.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 153.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 153.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 153.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 152.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 152.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 151.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 149.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 147.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 146.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 145.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 142.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 140.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 140.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 139.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 139.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 139.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 139.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 138.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 137.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 137.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 133.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 132.8
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 132.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 129.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 127.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 126.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 125.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 122.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 120.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 119.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 118.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 117.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 117.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 114.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 114.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 112.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 111.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 110.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 109.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 108.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 107.4
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 106.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 106.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 103.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 100.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 98.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 95.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 95.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 94.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 94.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 93.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 92.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 92.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 88.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 88.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 87.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 86.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 85.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 83.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 80.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 80.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 79.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 74.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 69.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 69.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 68.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 62.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 61.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 58.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 54.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 53.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 51.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 50.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 44.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 41.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 35.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 34.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 214.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 214.4
FF:10204-103F6 68 years, female 214.4

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