HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.5 nTPM
HPA:13.5 nTPM
GTEx:11.1 nTPM
FANTOM5:18.3 Scaled Tags Per Million
Mouse:37.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030247Antibody HPA073145
Glial cells Not detectedHigh
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.2
2148 Female, age 91, left hemisphere 21.1
2621 Female, age 67, right hemisphere 10.7
1855 Male, age 76, left hemisphere 9.7
1911 Female, age 85, right hemisphere 7.0
1898 Male, age 80, left hemisphere 6.7
2529 Female, age 94, left hemisphere 6.0
Dentate gyrus
nTPM: 11.6
2531 Female, age 67, both hemispheres 20.3
1927 Female, age 91, both hemispheres 13.2
2528 Male, age 74, both hemispheres 11.5
2246 Female, age 85, both hemispheres 9.0
2010 Male, age 76, both hemispheres 8.0
2530 Female, age 94, left hemisphere 7.4
Entorhinal gyrus
nTPM: 6.0
2686 Male, age 75, right hemisphere 8.7
2764 Male, age 80, right hemisphere 6.5
1938 Female, age 85, left hemisphere 6.0
2613 Female, age 94, left hemisphere 5.3
1787 Male, age 76, left hemisphere 5.2
2117 Female, age 91, right hemisphere 4.5
Hippocampus, CA1
nTPM: 9.8
2045 Male, age 76, both hemispheres 23.5
1873 Female, age 85, both hemispheres 9.9
2527 Male, age 74, both hemispheres 7.2
2082 Female, age 91, right hemisphere 5.1
2749 Male, age 80, left hemisphere 3.1
Hippocampus, CA2
nTPM: 5.8
2437 Female, age 94, left hemisphere 6.8
1892 Male, age 76, both hemispheres 6.5
1940 Female, age 85, left hemisphere 6.2
2113 Female, age 91, right hemisphere 5.9
1963 Male, age 80, left hemisphere 4.9
2249 Male, age 74, both hemispheres 4.4
Hippocampus, CA3
nTPM: 13.5
2620 Female, age 94, left hemisphere 31.4
2861 Female, age 67, both hemispheres 19.0
1891 Female, age 85, both hemispheres 10.1
1867 Male, age 76, both hemispheres 8.5
2436 Male, age 74, both hemispheres 6.0
2137 Male, age 80, left hemisphere 5.8
Parahippocampal cortex
nTPM: 5.7
2693 Female, age 94, both hemispheres 7.6
1850 Male, age 80, both hemispheres 6.7
2622 Female, age 67, right hemisphere 6.3
1933 Female, age 85, both hemispheres 5.9
2692 Male, age 74, both hemispheres 5.7
2245 Female, age 91, both hemispheres 5.4
2018 Male, age 76, both hemispheres 5.2
2532 Female, age 72, left hemisphere 5.2
1990 Female, age 91, right hemisphere 5.1
2250 Female, age 67, right hemisphere 4.3
Perirhinal gyrus
nTPM: 7.0
1794 Male, age 80, right hemisphere 8.2
2521 Female, age 94, right hemisphere 8.2
1841 Female, age 85, right hemisphere 6.5
2848 Male, age 76, right hemisphere 6.2
1847 Female, age 91, left hemisphere 6.1
Subiculum
nTPM: 5.6
2729 Female, age 91, right hemisphere 10.7
2619 Male, age 74, both hemispheres 5.5
2438 Female, age 94, left hemisphere 4.9
1977 Female, age 85, both hemispheres 4.8
1901 Male, age 80, both hemispheres 4.1
2042 Male, age 76, both hemispheres 3.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 60.1
Min nTPM: 2.1
Std nTPM: 8.3
Median nTPM: 8.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 60.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 44.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 38.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 37.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 34.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 34.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 33.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 33.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 33.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 31.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 31.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.3
FF:10169-103B7 60 years, female 18.8
FF:10153-102I9 76 years, female 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 44.4
Min nTPM: 34.3
Sample A Male 34.6
Sample B Male 34.3
Sample C Female 35.8
Sample D Female 44.4
Hippocampal formation
nTPM: 35.8
Samples: 4

Max nTPM: 38.8
Min nTPM: 31.3
Sample A Male 35.3
Sample B Male 31.3
Sample C Female 37.7
Sample D Female 38.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
769 Antisense, RP_Baylor_103232, Mouse strain C57BL/6J (56 days, male) 1.3
768 Antisense, RP_Baylor_103232, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.