HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.5 nTPM
HPA:67.5 nTPM
GTEx:55.4 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:50.8 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042117Antibody HPA046767
Glial cells Not detectedLow
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.5
Sample id Sample description nTPM
Hippocampus
nTPM: 65.9
1898 Male, age 80, left hemisphere 69.9
1855 Male, age 76, left hemisphere 65.4
2148 Female, age 91, left hemisphere 65.3
2621 Female, age 67, right hemisphere 65.3
1911 Female, age 85, right hemisphere 65.2
2529 Female, age 94, left hemisphere 64.3
Dentate gyrus
nTPM: 65.7
2010 Male, age 76, both hemispheres 67.7
1927 Female, age 91, both hemispheres 67.0
2530 Female, age 94, left hemisphere 66.1
2246 Female, age 85, both hemispheres 65.5
2528 Male, age 74, both hemispheres 64.6
2531 Female, age 67, both hemispheres 63.2
Entorhinal gyrus
nTPM: 66.0
2117 Female, age 91, right hemisphere 66.8
2764 Male, age 80, right hemisphere 66.7
1938 Female, age 85, left hemisphere 66.3
2613 Female, age 94, left hemisphere 65.7
2686 Male, age 75, right hemisphere 65.7
1787 Male, age 76, left hemisphere 64.9
Hippocampus, CA1
nTPM: 67.5
2749 Male, age 80, left hemisphere 72.6
1873 Female, age 85, both hemispheres 67.7
2527 Male, age 74, both hemispheres 67.0
2045 Male, age 76, both hemispheres 65.9
2082 Female, age 91, right hemisphere 64.5
Hippocampus, CA2
nTPM: 66.5
1892 Male, age 76, both hemispheres 69.9
2437 Female, age 94, left hemisphere 67.3
1963 Male, age 80, left hemisphere 66.9
2249 Male, age 74, both hemispheres 66.0
1940 Female, age 85, left hemisphere 65.5
2113 Female, age 91, right hemisphere 63.5
Hippocampus, CA3
nTPM: 67.1
1867 Male, age 76, both hemispheres 68.9
2620 Female, age 94, left hemisphere 68.8
2137 Male, age 80, left hemisphere 67.3
2436 Male, age 74, both hemispheres 66.9
1891 Female, age 85, both hemispheres 66.8
2861 Female, age 67, both hemispheres 64.0
Parahippocampal cortex
nTPM: 65.4
2018 Male, age 76, both hemispheres 68.1
1850 Male, age 80, both hemispheres 67.4
1933 Female, age 85, both hemispheres 66.0
2532 Female, age 72, left hemisphere 66.0
1990 Female, age 91, right hemisphere 65.9
2245 Female, age 91, both hemispheres 65.6
2692 Male, age 74, both hemispheres 64.8
2250 Female, age 67, right hemisphere 64.3
2693 Female, age 94, both hemispheres 63.4
2622 Female, age 67, right hemisphere 62.4
Perirhinal gyrus
nTPM: 66.5
1847 Female, age 91, left hemisphere 68.8
1794 Male, age 80, right hemisphere 68.0
1841 Female, age 85, right hemisphere 67.1
2848 Male, age 76, right hemisphere 64.7
2521 Female, age 94, right hemisphere 63.9
Subiculum
nTPM: 66.1
1901 Male, age 80, both hemispheres 68.2
2438 Female, age 94, left hemisphere 66.3
2619 Male, age 74, both hemispheres 66.0
1977 Female, age 85, both hemispheres 65.9
2042 Male, age 76, both hemispheres 65.5
2729 Female, age 91, right hemisphere 64.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.4
Samples: 197

Max nTPM: 148.4
Min nTPM: 23.8
Std nTPM: 15.8
Median nTPM: 52.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 148.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 116.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 103.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 100.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 94.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 93.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 91.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 91.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 89.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 87.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.5
FF:10169-103B7 60 years, female 38.7
FF:10153-102I9 76 years, female 24.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 24.0
Min nTPM: 16.0
Sample A Female 24.0
Sample B Female 20.1
Sample C Male 19.7
Sample D Male 16.0
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.3
Sample A Female 19.6
Sample B Female 23.7
Sample C Male 18.5
Sample D Male 16.3
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.7
Sample A Female 20.2
Sample B Female 16.9
Sample C Male 17.2
Sample D Male 15.7
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.4
Sample A Female 15.9
Sample B Female 13.4
Sample C Male 19.3
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.8
Samples: 4

Max nTPM: 53.6
Min nTPM: 45.4
Sample A Male 45.4
Sample B Male 53.6
Sample C Female 46.1
Sample D Female 46.1
Hippocampal formation
nTPM: 50.8
Samples: 4

Max nTPM: 57.6
Min nTPM: 43.6
Sample A Male 53.8
Sample B Male 48.3
Sample C Female 43.6
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69262249 Antisense, RP_050301_01_H09, Mouse strain C57BL/6J (56 days, male) 0.7
74819464 Antisense, RP_060315_02_F06, Mouse strain C57BL/6J (56 days, male) 0.6

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