HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.9 nTPM
HPA:19.9 nTPM
GTEx:33.5 nTPM
FANTOM5:16.1 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:40.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046755
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.9
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
1898 Male, age 80, left hemisphere 20.4
2621 Female, age 67, right hemisphere 16.6
1855 Male, age 76, left hemisphere 16.1
2529 Female, age 94, left hemisphere 14.9
1911 Female, age 85, right hemisphere 14.4
2148 Female, age 91, left hemisphere 14.0
Dentate gyrus
nTPM: 15.3
2530 Female, age 94, left hemisphere 17.0
2010 Male, age 76, both hemispheres 16.5
1927 Female, age 91, both hemispheres 15.1
2531 Female, age 67, both hemispheres 14.8
2246 Female, age 85, both hemispheres 14.4
2528 Male, age 74, both hemispheres 14.2
Entorhinal gyrus
nTPM: 18.5
2764 Male, age 80, right hemisphere 20.4
1938 Female, age 85, left hemisphere 20.3
2613 Female, age 94, left hemisphere 19.9
1787 Male, age 76, left hemisphere 19.6
2686 Male, age 75, right hemisphere 15.7
2117 Female, age 91, right hemisphere 15.3
Hippocampus, CA1
nTPM: 16.1
2749 Male, age 80, left hemisphere 20.8
2527 Male, age 74, both hemispheres 15.4
1873 Female, age 85, both hemispheres 15.3
2082 Female, age 91, right hemisphere 14.7
2045 Male, age 76, both hemispheres 14.5
Hippocampus, CA2
nTPM: 17.5
1892 Male, age 76, both hemispheres 21.6
2437 Female, age 94, left hemisphere 19.7
1963 Male, age 80, left hemisphere 16.7
1940 Female, age 85, left hemisphere 16.5
2249 Male, age 74, both hemispheres 15.7
2113 Female, age 91, right hemisphere 14.9
Hippocampus, CA3
nTPM: 16.0
1867 Male, age 76, both hemispheres 20.1
2436 Male, age 74, both hemispheres 17.4
2137 Male, age 80, left hemisphere 16.3
1891 Female, age 85, both hemispheres 15.3
2861 Female, age 67, both hemispheres 14.3
2620 Female, age 94, left hemisphere 12.9
Parahippocampal cortex
nTPM: 17.2
1850 Male, age 80, both hemispheres 19.3
2250 Female, age 67, right hemisphere 19.3
1933 Female, age 85, both hemispheres 19.2
2693 Female, age 94, both hemispheres 18.1
1990 Female, age 91, right hemisphere 17.5
2018 Male, age 76, both hemispheres 16.9
2532 Female, age 72, left hemisphere 16.9
2245 Female, age 91, both hemispheres 16.2
2692 Male, age 74, both hemispheres 15.3
2622 Female, age 67, right hemisphere 13.4
Perirhinal gyrus
nTPM: 19.9
1847 Female, age 91, left hemisphere 21.3
1794 Male, age 80, right hemisphere 20.8
2521 Female, age 94, right hemisphere 19.4
2848 Male, age 76, right hemisphere 19.3
1841 Female, age 85, right hemisphere 18.9
Subiculum
nTPM: 17.0
2438 Female, age 94, left hemisphere 20.2
1977 Female, age 85, both hemispheres 19.2
1901 Male, age 80, both hemispheres 17.1
2619 Male, age 74, both hemispheres 17.1
2042 Male, age 76, both hemispheres 14.8
2729 Female, age 91, right hemisphere 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.5
Samples: 197

Max nTPM: 95.3
Min nTPM: 8.5
Std nTPM: 15.9
Median nTPM: 31.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 95.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 87.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 80.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 80.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 78.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 76.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 74.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 74.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 66.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 66.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.1
FF:10153-102I9 76 years, female 19.6
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 11.9
Min nTPM: 5.9
Sample A Female 11.9
Sample B Female 8.1
Sample C Male 11.1
Sample D Male 5.9
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.4
Sample A Female 15.9
Sample B Female 18.7
Sample C Male 20.7
Sample D Male 14.4
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 18.9
Min nTPM: 12.5
Sample A Female 18.9
Sample B Female 12.8
Sample C Male 13.3
Sample D Male 12.5
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 8.0
Sample A Female 9.4
Sample B Female 9.6
Sample C Male 15.0
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.3
Sample A Male 32.1
Sample B Male 34.4
Sample C Female 34.6
Sample D Female 30.3
Hippocampal formation
nTPM: 40.8
Samples: 4

Max nTPM: 45.4
Min nTPM: 38.7
Sample A Male 45.4
Sample B Male 39.7
Sample C Female 39.5
Sample D Female 38.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
75749421 Antisense, RP_060518_04_E05, Mouse strain C57BL/6J (56 days, male) 1.3

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